| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8066 |
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| Symbol | |
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| ID | 7365175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 44012 |
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| End bp | 44956 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641715 |
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| Product | hypothetical protein |
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| Protein accession | YP_002540012 |
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| Protein GI | 222080149 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0556463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAC TTTTCGAGCG AGCGGAAACG GGTTCGGCAA CATCATTCCG CGACCTGCAT
ATCATCCTCG ATGCCATGCC TGTTGCCATG TCCTGGGCGA CCCTTCCGGG CGGGGACATC
CGTTTCGTCA ATCGCACCTT TATCAGGTTG TTCGGATATC CTGAAAGCCG TTTCGCAACC
GTCGATGAGT GGATTGCAGA AGTCTACGCA ACGTCGGCAG AGCGGCGTAC CGCCCGCGAA
CGTTGGGCCG CTCTCTGGAG GGGAGACCAA TCGGGCATTG CGGAAATCGA TCCGCTTGAA
TGCCGGGTGC GTTGTGCTGA TGGGACATAT CGCACAACGC TCCACCGCGG GACCTTACTT
TGGGATGTCG GGATAGGGAT CGCTACTTTC GAGGACATTT CAGATCGCAA AATTGCCGAA
GACGCCATCC GTCGCATCGC AATGGAAGAT CCTCTTACCG AACTCGCAAA CCGCCGGGCG
TTGCACGAGC GCTGGGAAAC CGAAGTCACA TCGGCACCAA CGAAAGCCAA CCTCAAGCTG
GGGGTCCTGC TCGTTGACCT CGACGGTTTT AAGCCGGTCA ACGACCGTCT GGGGCACGAG
GCTGGCGATC AAGTCCTGAA GATGGTTGCC GATCGCCTGC GCAACGCCGT CCGCGATACG
GATCTCGTCG GCCGGATTGG TGGCGATGAG TTTGTGGTTC TGTTGTCCAG CCTTCAGAGC
GACACACAGG CAGAGGCTAT CTGTGATCGC ATCAATGCCA CCTTTGACGC GCCATTCGTA
TTTGATGTGG AAACGATAAC CCTTGGCGCG AGCATCGGGG TCAGCCTTTA TCCGCAAGAC
GCCACAGATC TGGCCGGTCT TATACGGCAA GCCGATCAGG CTCTTTACAG ACGAAAAAGG
ACAGGGCGGG GTGGTTGGGA ATGGTTCTCC AATCCCGCCG CATAA
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| Protein sequence | MKELFERAET GSATSFRDLH IILDAMPVAM SWATLPGGDI RFVNRTFIRL FGYPESRFAT
VDEWIAEVYA TSAERRTARE RWAALWRGDQ SGIAEIDPLE CRVRCADGTY RTTLHRGTLL
WDVGIGIATF EDISDRKIAE DAIRRIAMED PLTELANRRA LHERWETEVT SAPTKANLKL
GVLLVDLDGF KPVNDRLGHE AGDQVLKMVA DRLRNAVRDT DLVGRIGGDE FVVLLSSLQS
DTQAEAICDR INATFDAPFV FDVETITLGA SIGVSLYPQD ATDLAGLIRQ ADQALYRRKR
TGRGGWEWFS NPAA
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