| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7692 |
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| Symbol | hmgL |
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| ID | 7380195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 624612 |
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| End bp | 625535 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641678 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_002539975 |
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| Protein GI | 222102936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAA CCAGCGGCGA CAACATCGTC ATTGTCGAGG TCGGCCCAAG AGACGGCTTG
CAAAACGAAG CCGCTATTGT TTCCACCGAT GTAAAGATCG AATTGGTGAA ACGGCTGGCC
AGAGCTGGCC TTGATCACAT CGAAGCAACC GCTTTTGTGT CGCCAAAATG GGTTCCGCAA
ATGGCCGATA GTACCGATGT TATGACGGCT TGCGCCTCGG CAGCGGAGCT TTCGCATGTC
ACCCTCTCGG CCCTCACGCC CAATCTCAAA GGTTTCGAGG CCGCCATTAC TGCCGGAAGC
CGCGAGGTGG CGGTGTTTGC CTCTGCCTCC GAGACCTTCT CCCGGCGCAA CATCAATTGC
TCGATTGACG ACTCCTTCAC ACGCTTCGAG CCGATTTTCG AGGCGGCGCG GGCTGTGGGC
ATTCCAGTGC GCGGCTATGT TTCCTGCGTC ATCGCCTGCC CTTATGAGGG CGCGATTGAT
CCGCATGCTG TCGCGCGCGT TAGCCGTCTG CTGCTGGAAA AGGGAGCGCG TGAAGTCTCC
CTTGGCGACA CAATCGGGGT TGGAACACCT GCGAAGGTCA AGCGCATGAT TGAAGCGGTG
GCGGCAGAGG CACCCTTATC GGTGCTGGCA GGACATTTCC ACGACACCTA TGGCATGGGG
ATCGCCAATA TTCAGGCCGC ACTCGATGCG GGCATCCGTG TGTTCGACAG CTCTGTCGGT
GGCCTCGGCG GCTGCCCTTA TGCCGCTGGC GCGGCTGGCA ATGTTGCGAC AGAGGAAGTG
GTCTATCTGC TGCAAGACCT CGGCCTGTGC CGCGATATAG ACCTGCCCAG ACTGGCTGAA
ACTGCCGCAT GGATCAGCCA CATCACCGGA CTAACGGATG TCTCGCGTGT TACGAAAGCT
CTGATGGGCA GTTCAAAGAG CTGA
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| Protein sequence | MHQTSGDNIV IVEVGPRDGL QNEAAIVSTD VKIELVKRLA RAGLDHIEAT AFVSPKWVPQ
MADSTDVMTA CASAAELSHV TLSALTPNLK GFEAAITAGS REVAVFASAS ETFSRRNINC
SIDDSFTRFE PIFEAARAVG IPVRGYVSCV IACPYEGAID PHAVARVSRL LLEKGAREVS
LGDTIGVGTP AKVKRMIEAV AAEAPLSVLA GHFHDTYGMG IANIQAALDA GIRVFDSSVG
GLGGCPYAAG AAGNVATEEV VYLLQDLGLC RDIDLPRLAE TAAWISHITG LTDVSRVTKA
LMGSSKS
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