| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7679 |
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| Symbol | |
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| ID | 7380314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 608583 |
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| End bp | 609776 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641666 |
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| Product | Permeases of the major facilitator superfamily |
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| Protein accession | YP_002539963 |
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| Protein GI | 222102924 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00772538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATC TTGATACAAA GGGTACCCGC ACAGCCCTTA TTGTCGGTCA TGCGGCCGGT
ATGATCGATA TGGTCTCTCT TCCCATTTGG GTCGGTGGAC TGGTCGGTGG CTATGGCTAT
TCATCCGCTC AAGCCGGAGG ACTTGTCACC ACATTTCTGA TTGGGGTGGT GATTGCCAGT
TGCGGCCTTG CGACGCTTTT CCATCGCTTT TCCATGCGTT GGGTGCCCGG TGCAGGCTTT
AGCGGGGCTG CGCTGGCGTT CGCAGCACTC TGGATGGCAT CAGGTTTCGG CAATTTTCTC
GCACTTCACC TCTGTGCCGG TCTTTGCATC GGCACGGCTT TGTCAGCGGT TCATGGAACC
ATTGGCCGCA CAAGCAATGC TCATCGCACA TTTGCTTATG CCACCATTGG CTTTGGCATC
TTCAGCGTTA TCTTCATGGG CTTTGCCACG CAGGTGATTG CCGCAATGCA GCCACGCAAC
CTGTTCTTGA TTTTTGCCGG GGTTATGGCG ATCGCTGCCG CAGTCAATTG GTTGCTTTTC
CCCCACAGCG CCACCATGCC GAAGGCGGAG AAAAAACCAT CGCCCAATTC CGGTCGCGTG
CCGCGTTTTG AACCCGTCGT CTGGTTTCTC ATCGCCGCTC TGCTGGGCAT GAACTTCAAT
CAGGCCATGA ATTTCAGCTT TGTTGAGCGC ATTGCCAGTG ACCATGATTG GCCAACATCC
ACCATCAACG GCATTCTTGT GGGCGTTGCC TTTCTCAGCC TCATTCCGGC CCCGCTCGCA
GTGTTTTTTG AAAAAAAGCT TCATCCGGTT TATGTGGGCA TAGTAGGCGT GCTGCTTCAG
GCCGCTCTTT CGCTGGGCAT AACCCATGCG CTCGACGTTC CCGGTTTTGC CGCCTCGGCA
ATCTTCATTC CCTTTGTCAT GATCTTCTCG CACACATTTC TCTTCGGACT CATGTCGCGC
GTGGAACCAA CTGGCCGAGC AGTGGCGGCC AATCCGGCCA TTACCATGGG CGGCGGAGCG
CTTGGGCCTC TGGTTGGCGG CATTCTGGTC CAGACAATGG GCTATCATGG CCTCAGCCTT
GCAACCGCTC TGGTGGCCAC CTGTGTTGTG GCGGGACTAA TGCTGGTGCT GATGCGCCTG
TTGCCCTCGC ACGCCAGCAA CGCACTAGCC CCAAAAAGGC ACTGGCCATT GTGA
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| Protein sequence | MTNLDTKGTR TALIVGHAAG MIDMVSLPIW VGGLVGGYGY SSAQAGGLVT TFLIGVVIAS
CGLATLFHRF SMRWVPGAGF SGAALAFAAL WMASGFGNFL ALHLCAGLCI GTALSAVHGT
IGRTSNAHRT FAYATIGFGI FSVIFMGFAT QVIAAMQPRN LFLIFAGVMA IAAAVNWLLF
PHSATMPKAE KKPSPNSGRV PRFEPVVWFL IAALLGMNFN QAMNFSFVER IASDHDWPTS
TINGILVGVA FLSLIPAPLA VFFEKKLHPV YVGIVGVLLQ AALSLGITHA LDVPGFAASA
IFIPFVMIFS HTFLFGLMSR VEPTGRAVAA NPAITMGGGA LGPLVGGILV QTMGYHGLSL
ATALVATCVV AGLMLVLMRL LPSHASNALA PKRHWPL
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