| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7659 |
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| Symbol | |
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| ID | 7380299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 594078 |
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| End bp | 594845 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641651 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_002539948 |
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| Protein GI | 222102909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.54081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG ATCTCAATTC CGATATGGGC GAAGGCTTTG GTCCCTACCG CCTGTGTGAC
GATGAAGCAC TGATGGATGT TGTGTCCTCG GCCAATATTG CCTGCGGTTT TCATGCGGGC
GACCCGGAAA TGATGCTGCG CATGGTGCGG CTGGCCAAGG CCCGAGGCGT CGGCATTGGC
GCGCACCCCG GCTTTCCTGA TCGGCTGGGT TTTGGCCGCC GCGATATTCC CGTGTCAGCA
GAAGAACTGC GGGCGCAAGT GCTTTATCAA TTGGGGGCCT TGAGCGCGAT TGCCGCCAGC
GAAGGCCTTT CCGTTGATCA CATCAGCTTC CACGCCGCCA TGGGAAATCG CGTCAATCAC
GACCCGGCAC TGTGCGATCT GGTCCTGGCA GCGGTGAAAA CCGTGGCTCC TGAGATTATT
GTGTTTTGCA TGTCTGGCTC GGAAATCGAG CGCTCGGCGC TCCGCTGTGG ATTAAAGACG
CTGACGCTGT TTCTGGCCGA CCGCGCTTAT GATGCCAACG GCGCACTCGT GCCGCGCGGC
GTGGCCAATT CGGTCATCAA GGAAGAAATG GCGGTGCGCG CCCGCGTCAA ACAATTCCTT
GAAACGGCAA CCGTCACCAC CATCGACGGC CAGACCATTG CCATGCCCGC CCGCTCCATT
CTCGTGCATA GCGATACGCC CGGATCGCTG GAACTGGCGA AAATTGTGCG CAGCGAAATT
GAAGCCACGG GTGCTACCCT TGCCACTGCC CGCGACGTGA TTGCCTGA
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| Protein sequence | MKIDLNSDMG EGFGPYRLCD DEALMDVVSS ANIACGFHAG DPEMMLRMVR LAKARGVGIG
AHPGFPDRLG FGRRDIPVSA EELRAQVLYQ LGALSAIAAS EGLSVDHISF HAAMGNRVNH
DPALCDLVLA AVKTVAPEII VFCMSGSEIE RSALRCGLKT LTLFLADRAY DANGALVPRG
VANSVIKEEM AVRARVKQFL ETATVTTIDG QTIAMPARSI LVHSDTPGSL ELAKIVRSEI
EATGATLATA RDVIA
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