| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7652 |
|---|
| Symbol | menG |
|---|
| ID | 7380292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 588203 |
|---|
| End bp | 588877 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643641644 |
|---|
| Product | demethylmenaquinone methyltransferase |
|---|
| Protein accession | YP_002539941 |
|---|
| Protein GI | 222102902 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACA TTAAGAAAAT TCCCGAGCGT CCAAGCCAGC AAGAGATTGA TGCGATTGCG
AAATTCTCGC CTGCGACCCT GCATGAAGCG CAGGGTCGTC GCGGTGCGCT TTCCTCCCGC
ATCAAGCCAG TGGATTACCG CATGAAGCTT TGCGGGCCTG CTTTCACGGT CAAGTCTGCG
CCACGCGACA ACATCATGCT GCAACTGGCG ATCAATTATG CGCAACCGGG CGACATCATC
GTGGTGTCCG GCGGCGAATA CGAGGAGGCG GGGTCATTCG GTGATGTTCT GGCCAATGCC
TGCCTCGCCA AAGGCATTGG TGGCCTTGTG ACTGATACAG GTGTGCGCGA TACCTTGCAG
CTTCGAGATC TTGGCTTTCC GGTATTTTCA CTCAGTGTTT GCATCAAGGG AACCGTGAAG
GAAACCTTGA CCGCAGTGAA CGACCCGATT GTCATTGGCG ATGAGCTTGT TTTTCCGGGC
GACATTATCG TCGGTGATGC CGACGGTCTG GTGGTGGTCC GCCGACAGGA GGCGGTGGAT
GTTGCCGCAC TTGCCCAAGC CCGGGAAGAT GCTGAAGCTG GCTATATTGC CGCTTATAAG
GCGGGGAAGT CGGTCATTGA AGTCAGTAAT CTTGAGCCCG TGCTGAGGGC TAAAGGATTT
TCGGTCGAAG CGTGA
|
|---|
| Protein sequence | MIHIKKIPER PSQQEIDAIA KFSPATLHEA QGRRGALSSR IKPVDYRMKL CGPAFTVKSA
PRDNIMLQLA INYAQPGDII VVSGGEYEEA GSFGDVLANA CLAKGIGGLV TDTGVRDTLQ
LRDLGFPVFS LSVCIKGTVK ETLTAVNDPI VIGDELVFPG DIIVGDADGL VVVRRQEAVD
VAALAQARED AEAGYIAAYK AGKSVIEVSN LEPVLRAKGF SVEA
|
|---|
| |