| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7628 |
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| Symbol | |
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| ID | 7380277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 564492 |
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| End bp | 565277 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641629 |
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| Product | intracellular protease/amidase |
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| Protein accession | YP_002539926 |
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| Protein GI | 222102887 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.66836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC GGGACTTCAA TGTGCTTTTC ACAGCAGCAG GCGCAGGCCT GCTGCTGAAC
AACGGCATCG CATCGGCTCA AACGCCACCC CCCTCACCGG ATGGACCGGT TTTTGCCATG
CTGGTCCACC CTAAGATGAT CCTGCTGGAT CTGCTCGGTC CGATGACCGT TTTCAACATC
ACCAGGGGAA AGATTCACCT GGTCTGGAAA GACCAGACGC CGGTATCGAC GGATGTCGGT
ATTCCCGTCA CAGCCACGAC CACGTTCAAG AAGTGCCCTC GAAACGTCGA TGTCTTCTTC
ATTCCTGGTG GACTTGTCGG CTCGACTGAA CTGATGGAAG ACGCGGAGAC GCTTGACTTT
GTCAGGGAAA TGGCAGCTGG CGCAAAATAT GTGACCGCCG TCTGCACGGG ATCACTGGTC
CTCGGCGCGG CAGGTTTACT CAAGGGCAAG AGAGCAACAA CGCTCTGGAA CGTCCGCGAC
CTCCTGCCAA CATTCGGTGC AATTTCCGTC AATGAGCGCG TGGTAGAGGA CGGCAATCTC
ATCACAGGCG GCGGGACCAC CGCAGGGATC GATTTTGGCC TCTCCGTGGT TGCCAGATTG
CGCGGGGAAG ACCTTGCAAA GCGCATCCAG CTCATCATTG AATATGATCC CAAGCCGCCT
TTTGACGCTG GCAGTCCCGA CAAGGCCGGT CCTGACATCG CCAATGCCTT CCTGAAAATC
CGCAAGCCCG CCATGGATGA CGCAAAGGCC GCAGCGCAGC GGGCTGCTCG AAAGCTGTCG
CTGTGA
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| Protein sequence | MNRRDFNVLF TAAGAGLLLN NGIASAQTPP PSPDGPVFAM LVHPKMILLD LLGPMTVFNI
TRGKIHLVWK DQTPVSTDVG IPVTATTTFK KCPRNVDVFF IPGGLVGSTE LMEDAETLDF
VREMAAGAKY VTAVCTGSLV LGAAGLLKGK RATTLWNVRD LLPTFGAISV NERVVEDGNL
ITGGGTTAGI DFGLSVVARL RGEDLAKRIQ LIIEYDPKPP FDAGSPDKAG PDIANAFLKI
RKPAMDDAKA AAQRAARKLS L
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