Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7622 |
Symbol | |
ID | 7380272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 559787 |
End bp | 561076 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641624 |
Product | ABC transporter substrate binding protein (iron) |
Protein accession | YP_002539921 |
Protein GI | 222102882 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGTCG TCTTGCTTCT TTTTTCGCTG ACCGGCGCCG TGCTGGTGAT GGTGATGGTG ATCGCATTCG ACCATCTCAT CATCAGGCGC GTCAAGCCGC TTAAGCTCGC GCTGAACCGC CAGCCTTTCA CCATTGTGGT TGGCGCAGGA TCGCCCACCC GTCAAGATTT AACGCAAGGA AACATAATGA AAAAACTAGT CTTCTCAGCC TTTGTCGGCC TGATGGCCAT GACAGCCAGT GCCTTCGCCG ACATCACCGT TACCGATGTC AAGGGACGCA CCGTCACGGT ACCCAAGGTG CCGGAGCGTG TTGTCCTCAG CTTCTATTAT GAGGATTATC TTGCCATCGC CGGACCCGGC GCGCTCGACA AAGTCGTGGC TCTCTCCCTC TCCCCCTGGA AGGATTGGCG GCCAAACCAG TTCGCGGCCT ATGAAAAAGC GCTGCCAAAG CTCGCCTCCA TTCCCGACAT CGGTAGTACC GAGGACAATA CATTTTCGAT TGAGAAGGTG ATTGCGGCCA AACCCGACCT GCTCATTCTG GCGGCCTGGT CCTATGACGC GCTCGGGGAA GGCACCAAGC AGTTAGAGGC CGCCGGCATT CCGATCGTGA CGCTCGACTA CAATGCCCAG ACGGTCGAGA AACATGTCGC ATCCACCTTG GCACTCGGCA AGCTGATGGG GACGCAAGAC CGCGCCGAAA AGCTCGCCAA AAACTACAAG GATGCGATGG CAGACGTTCA GGCCCGCATC CAGAAAGCCG GCCCGACGGA GAAAAAGGTC TATGTCGAAC TGGCTCAGAA AGGGCCGGAT GAAGTCGGGA ACTCCTACGG CGATACGATG TGGGGCGCGC TGGTCGACAG GCTTGGTGGC CATAACATTG CCAAGGGACA GATCGGCAAT TGGGGGCCGC TAAGCCCGGA ATATGTCCTG GCACAAAAGC CGGACCTGAT TTTTCTGGGC GGGTCGGAGT GGCTGAACAA GCCGCAATCG GTGCAGGTCG GCTTTGGGGC TGATCCGGCG GTTACCCGCC AACGCATGAA GGCCTATCTC GGACGTCCGG GGTGGTCGGA TCTGCCAGCC GTAAAAGAGG GCGGCGCGCA TGCGATCTAC CATGGCGGCG CACGCACGCT GTCCGACTAT GTGTATGCGC AATATATCGC CAAACAGCTC TATCCGGATG CCTTCAAGAA CGTCGATCCG GCAAAGAACA TTGCTGATTA TTATAATAAT TGGCTGCCGA TCAAGGCCGA CGGTGTGTTT GTTCTCCCTT ATGAAGCGAA CGGACAATGA
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Protein sequence | MLVVLLLFSL TGAVLVMVMV IAFDHLIIRR VKPLKLALNR QPFTIVVGAG SPTRQDLTQG NIMKKLVFSA FVGLMAMTAS AFADITVTDV KGRTVTVPKV PERVVLSFYY EDYLAIAGPG ALDKVVALSL SPWKDWRPNQ FAAYEKALPK LASIPDIGST EDNTFSIEKV IAAKPDLLIL AAWSYDALGE GTKQLEAAGI PIVTLDYNAQ TVEKHVASTL ALGKLMGTQD RAEKLAKNYK DAMADVQARI QKAGPTEKKV YVELAQKGPD EVGNSYGDTM WGALVDRLGG HNIAKGQIGN WGPLSPEYVL AQKPDLIFLG GSEWLNKPQS VQVGFGADPA VTRQRMKAYL GRPGWSDLPA VKEGGAHAIY HGGARTLSDY VYAQYIAKQL YPDAFKNVDP AKNIADYYNN WLPIKADGVF VLPYEANGQ
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