Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7571 |
Symbol | |
ID | 7380101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 515995 |
End bp | 517008 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641583 |
Product | 6-phosphogluconate dehydrogenase-like protein |
Protein accession | YP_002539880 |
Protein GI | 222102841 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGG GAATGGTCGG CCTCGGTCGT ATGGGCGCGA ACATGGTGCG GCGTCTGATA AAGGCGGGGC ATGAATGCGT TGTCTATGAC GTCAATCCGC AAAACGTTGC TTCTCTTGAG GCCGAAGGCG CTGTCGGCGC GGCGAGCTAC GCCGATTTTC TCGCCAAATT GGCGACGCCC CGTGCTGTCT GGCTGATGCT GCCAGCCGCT ATCACGGGAA AGGTAGCCCG CGACCTGGCT GGCGAAATGA CGAGCGGCGA TATTCTGATC GATGGCGGAA ACTCCTATTA CCGCGACGCG GTCGATCTCG GAACTGAGCT TGGTTCTCAA GGTATTTCCT TCGTTGACGT CGGGACCAGT GGCGGGGTCT GGGGGATCGA TCGTGGCTAT AGCCTGATGA TCGGCGGTGA GAAGAAAGCC GCGCAGCATC TCGACCCCAT CTTTGCGGCG CTTGCTCCCG GAAAAGACGG CGCAGGGGCC ACGGGCGGCA CGGCCGACGC GGGAACGGAA GGCTACCTGC ACTGCGGTCC GCCCGGTGCC GGTCACTTCG TCAAGATGGT GCATAATGGT ATCGAATATG GAATCATGGC CGCCTATGCC GAAGGGCTGA ACATCCTGAA GGCTGCTGAT GCAGGCAGCG AGGCGCGTGA CGCCGATGCC GAAACCGCGC CATTGCGGGA TCCGCAATAC TACCGTTTCA ATCTTGATCT GGTGGCTGTG ACAGAAGTCT GGCGCCATGG CAGTGTCATT GGCTCCTGGT TGCTTGATCT CACGGCATCC GCGTTGAAGC AGGATCCGCA ATTGTCAAAC TATGGTGGTC GCGTGTCGGA TTCAGGCGAA GGCCGTTGGA CATTGCAGGC GGCGGTCGAG ACTGGAGTAC CGGCTCCGGT CCTGTCTTCT GCCTTGTTCG GACGCTTCAC CTCGCGCGAC AACGATGAGT TTGCCAACAA GCTGCTCTCG GCCATGCGGC ACGCCTTTGG CGGTCATGTG GAGAAGCCGG AGAGCACGTC ATGA
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Protein sequence | MQLGMVGLGR MGANMVRRLI KAGHECVVYD VNPQNVASLE AEGAVGAASY ADFLAKLATP RAVWLMLPAA ITGKVARDLA GEMTSGDILI DGGNSYYRDA VDLGTELGSQ GISFVDVGTS GGVWGIDRGY SLMIGGEKKA AQHLDPIFAA LAPGKDGAGA TGGTADAGTE GYLHCGPPGA GHFVKMVHNG IEYGIMAAYA EGLNILKAAD AGSEARDADA ETAPLRDPQY YRFNLDLVAV TEVWRHGSVI GSWLLDLTAS ALKQDPQLSN YGGRVSDSGE GRWTLQAAVE TGVPAPVLSS ALFGRFTSRD NDEFANKLLS AMRHAFGGHV EKPESTS
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