| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7481 |
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| Symbol | |
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| ID | 7380037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 438409 |
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| End bp | 439251 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641521 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539818 |
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| Protein GI | 222102779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0434] Predicted TIM-barrel enzyme |
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| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0069483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGATA TATCCGACAA CACATCAAGC ACTATGCGAG AAATTTTCGG GCGCGACAAG
GCGCTGATCG GCATGATCCA TTGCCCGGCA TTTCCCGGTG CGCCGCGCTA TCGCGGCGCG
AGCATGACAG AGATTTACGA TGCCTGCATG CTTGATGCCG AAGCCCTGAT CGAAGGCGGC
ATGCATGGAC TGATCATTGA AAACCACGGC GACATTCCCT TTTCCAAACC GGATGACATT
GGGCCGGAAA CATCTGCTTT CATGAGCGTT GTCACTGACC GCATTTGCCG TGCGGTTGGC
GTGCCACTGG GCATCAATGT CCTGGCCAAT GCACCCATTC CGGCCTTTGC CATTGCCATG
GCGGGCGGGG CAAAATTCGT GCGGGTCAAC CAATGGGCCA ATGCCTATGT CGCCAATGAA
GGCTTCATGG AGGGACGGGC GGCGGAGGCC ATGCGCTACC GTTCCATGCT GCGGGCCGAA
CATATCAAGG TGTTTGCCGA TAGCCATGTC AAGCACGGCG CCCACGCCAT CACCGCCGAC
CGCACCATTC AGGAATTGAC CCGCGATCTC GCCTTTTTCG ATGCCGACGC GGTGATTGCC
ACCGGCCAGC GCACCGGCAA TTCCGCGACC ATGGAGGAGA TTGAAGAGAT TGGAGCGGCG
ACACATCTGC CCCTTTTGGT TGGTTCGGGT GTTTCCAAGG ACAATATCGT CGAGATCCTG
AAACGCACCA ACGGCGTTAT CGTCGCTTCA TCACTCAAAC ATGGCGATGT CTGGTGGAAT
CCGGTCGATA TCGAACGGGT CAAAGCTTTC GTGGCGACGG CCCAGCCCGG TTTGAAAGCA
TAA
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| Protein sequence | MLDISDNTSS TMREIFGRDK ALIGMIHCPA FPGAPRYRGA SMTEIYDACM LDAEALIEGG
MHGLIIENHG DIPFSKPDDI GPETSAFMSV VTDRICRAVG VPLGINVLAN APIPAFAIAM
AGGAKFVRVN QWANAYVANE GFMEGRAAEA MRYRSMLRAE HIKVFADSHV KHGAHAITAD
RTIQELTRDL AFFDADAVIA TGQRTGNSAT MEEIEEIGAA THLPLLVGSG VSKDNIVEIL
KRTNGVIVAS SLKHGDVWWN PVDIERVKAF VATAQPGLKA
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