Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7434 |
Symbol | |
ID | 7380463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 403063 |
End bp | 403926 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641491 |
Product | ABC transporter membrane spanning protein (branched chain amino acid) |
Protein accession | YP_002539788 |
Protein GI | 222102749 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTGGC TTGATACCAT TCTGCAAGGC GCGCTGCTGG GCGGCCTCTA CGCGCTGTTT GCCGCAGGTC TCAGTCTGGT CTTCGGCATT ATGCGACTGG TCAATCTTGC GCATGGCGAC CTGATTGTCC TCGCCTCTTT CCTGATCCTG ATGCTCGCCA ATACCTTCGG GATCAACCCG TTTCTTGCAG CCCTGATTGC CATCCCGCTG ATGTTTGGGC TTGGCTGGCT GTTGCAGACC TATCTTTTGA ACCGCACACT CGGCAAGGAT ATCCTGCCGC CACTGCTGGT CACGTTCGGC CTCTCCATCG TGATCCAAAA TGGCCTTCTG GAAGGCTTCA CCGCCGATAG TCGTCGTCTT TCGACAGGCG TTTTGGAAAC CGCATCGCTG CCTTTGGCGG GACTGAACAT CGGTATCATG CCGCTTTTGA CGTTCGGATC GGCGATCATC GTCATTATCG CGCTCAACCA GTTGATCTAT CGTACCTCGC TTGGTCGGGC ATTTCGGGCC ACATCCGATG ATCCGGTGAC AGCTGGCATG ATGGGCGTGC GGCCGCACCG TATCTTTGCC ATGGCAACAG GGCTTGCCAT GGTTGTGGTC ACAATCGCGG CTCTTTATCT CAGCACCCGC GCCAATTTCG ACCCCACCGC TGGGCCATCG CGGCTGATCT ATGCCTTCGA GGCGGTCATC ATTGGCGGAC TCGGATCACT GTGGGGCACA CTGGCGGGCG GTGTTGTTTT GGGTATCGCT CAAACGCTCG GTGCAGCCAT CAATCCCGAA TGGCAGATTT TGGCAGGCCA TATCGCCTTC TTGATCGTGC TTCTGGTCAG GCCACGCGGC TTGTTTCCCC GCGCCAATGA TTGA
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Protein sequence | MNWLDTILQG ALLGGLYALF AAGLSLVFGI MRLVNLAHGD LIVLASFLIL MLANTFGINP FLAALIAIPL MFGLGWLLQT YLLNRTLGKD ILPPLLVTFG LSIVIQNGLL EGFTADSRRL STGVLETASL PLAGLNIGIM PLLTFGSAII VIIALNQLIY RTSLGRAFRA TSDDPVTAGM MGVRPHRIFA MATGLAMVVV TIAALYLSTR ANFDPTAGPS RLIYAFEAVI IGGLGSLWGT LAGGVVLGIA QTLGAAINPE WQILAGHIAF LIVLLVRPRG LFPRAND
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