Gene Avi_7422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7422 
Symbol 
ID7380453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand+ 
Start bp393334 
End bp393894 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID643641481 
Producthypothetical protein 
Protein accessionYP_002539778 
Protein GI222102739 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.752552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGCA TAAAATATTT GCGAATGGAG GATCTCCAGC CCGAGCATCG CAACATCCCG 
CGCATGACGT CGAATATTAC GCGGGCGGTT GCGCATAGTC CTGTTCTGGC GAATCTTGTT 
GCAGCAAGGG GAATGTATTT CCGCCATCAA AGCGGGTTGA ACCCACGCCT GCGCGAACTG 
GCAATCTTGC AAGTCGGCTA CAGCACCCGC TCTGCCTATG AATGGGCGCA TCACATCGAT 
GTGGCGCTGT CCTTTGGGGT GAGCCGGGAT GATATCCGGG CGATCGGCGT GGAGAGCGAA 
GGTGGCGAGA CCCATCTGGA GCCGCTGGCG CGGGTCGTGC TGGCGGCAAC AAGAGAGCTC 
ACAGATCACA TCACGCTCTC CGGGGAGCGT TTCGATCAAC TCGCGCAAGC CCTCAGCAGC 
GAGCACCTTG TGGATCTGCT GGTCACCATC GGCGAATATA TCGGTCTCGT TCGCGTCATG 
GCGGCCATCG AGATTGATCT GGAGCCAGAA TATATCCCGT TCCTGCAGGA GTTTCCACTC 
CCCGGGACGG GAAGACTTTG A
 
Protein sequence
MGRIKYLRME DLQPEHRNIP RMTSNITRAV AHSPVLANLV AARGMYFRHQ SGLNPRLREL 
AILQVGYSTR SAYEWAHHID VALSFGVSRD DIRAIGVESE GGETHLEPLA RVVLAATREL 
TDHITLSGER FDQLAQALSS EHLVDLLVTI GEYIGLVRVM AAIEIDLEPE YIPFLQEFPL 
PGTGRL