Gene Avi_7419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7419 
Symbol 
ID7380451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp391694 
End bp392398 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID643641479 
Producthypothetical protein 
Protein accessionYP_002539776 
Protein GI222102737 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGGTG TTGAGCGGCG TTATCACGCC GGAGATACAG AATGTATCGG ATATTATGCG 
GCGGGAGACA GCGCCGCCAA AACCGGCGTT CTGTTGCTGC ATGAAGCGCC GGGGCTTGGC
CCCCATATGC GCAGACGCGC CGACATGCTG GCGAGCCTTG GCTATCACGC CTTCGCTGCG
GATTTATACG GGGCAGGGCA ATTGGTGAAA GAGCCTGCGC AGGCACGAGC CTTGGTGGGC
GCATTGAAAG CGCAGCCCGG TCTGTTGCTC GCGCGTATCG AAGCCGGGTT GAAAGCCCTC
TCTGACGCCG CCCGGTTGGA TGTCGGGGCT ATCGCTGTCG CTGGCTATTG TTTCGGTGGC
TGGTGCGGGT TGGAACTGGC CCGGTCGGGT GTTCCTGTCA AAAGCGCAAC CGTCTTTCAT
GGCGCACTGA CGAGCGATCG AGGTGCGGCA GGCATCAAGA CCTCCCTGAT GGTTTGTGTC
GGTGATGCCG ACCCTTTTTC GCCGATGAGC CAAATACACG GCTTCCAGCA GGACATGAGC
ACCGCAGGTG TCGACTACCA ACTGTGCCTC TTCGGGGGTG TTGGTCACGG GTTCACCGAT
CCAGATATTC ATGAGGCTGG CCCCGGCTTT GGCTATGACG CCAAGGCTGA CGCCTGCTCA
TGGGGCGCTT TCATTTCCCT TCTGGGTGGA ACACCGGCTG CCTAG
 
Protein sequence
MRGVERRYHA GDTECIGYYA AGDSAAKTGV LLLHEAPGLG PHMRRRADML ASLGYHAFAA 
DLYGAGQLVK EPAQARALVG ALKAQPGLLL ARIEAGLKAL SDAARLDVGA IAVAGYCFGG
WCGLELARSG VPVKSATVFH GALTSDRGAA GIKTSLMVCV GDADPFSPMS QIHGFQQDMS
TAGVDYQLCL FGGVGHGFTD PDIHEAGPGF GYDAKADACS WGAFISLLGG TPAA