Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7418 |
Symbol | |
ID | 7380450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 391027 |
End bp | 391692 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643641478 |
Product | gamma-carboxymuconolactone decarboxylase subunit |
Protein accession | YP_002539775 |
Protein GI | 222102736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0051102 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCCT ACTCACCAGC CTATGTTGCG GCCTATCTCG ATTTCTCCGT CTATTCCGAC GAGCAAGGGT CGATATCGCC AAAACTGCGC GAATTGATCT ATGTGGCAAC GAATTGTTCG CCCACACATA TGTTCGAAAA GGGGTTTAAA AACCACGCCC GGCAGGCACT GGATTTGGGG GCTAGCCCGT CAGAGCTTCT TTCCGTAGTC GCAACGGTTA GCGCGATGGG CATTCACTCT TATCTGCTCG CCGCTGAAGC AATTGCCGAG TTCGCGCCCG GTGAGATTGT TGTCGATGAG CCGTCTGCGA CGATGGTGCG CAAGGAGCAT CTTGCCGTTT TCGGGGCCGT CTTGGAAGAA GTTCAGGCCG GAATAAAGCT TGATCCGAAG TTCTATCAAT GCTGGCTCAA TTTCGCGGCC GCCCCGATGC GGGGTCCAGA TGCGACACTG TCGATGAAGG AGGCGCATCT GATTGCGCTT GCGGTTCATG CGCAGGTCAC ACAACTCAAT CCGGTCGGTG TGCGTCAGCA TGTGCGGGCA GCCTTGGAGC ATGGAGCAAG TGCACGGGAA GTGCTCGATG TGTGCAAACA GATATCGAGC ATGGGCATTC ACGCCATGGT TTTTGGCCTG CCAATCATCA ATAGCTTAAC ACGGGGAGGT GTTTGA
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Protein sequence | MLSYSPAYVA AYLDFSVYSD EQGSISPKLR ELIYVATNCS PTHMFEKGFK NHARQALDLG ASPSELLSVV ATVSAMGIHS YLLAAEAIAE FAPGEIVVDE PSATMVRKEH LAVFGAVLEE VQAGIKLDPK FYQCWLNFAA APMRGPDATL SMKEAHLIAL AVHAQVTQLN PVGVRQHVRA ALEHGASARE VLDVCKQISS MGIHAMVFGL PIINSLTRGG V
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