| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7381 |
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| Symbol | |
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| ID | 7380421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 356732 |
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| End bp | 357940 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641449 |
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| Product | permease |
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| Protein accession | YP_002539746 |
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| Protein GI | 222102707 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0862221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA GAACATCACA ATTTAACAGC GCAGCTATAG ACCTCGATAC CGCTGAGCCG
GTTGCGTGGA GCCCTGCCAC CTGGTTTGCC GTCCTTTCGA TGGCGGCCAC CAGTTTTGCG
CTGGTGTCGG CTGAGTTCCT GCCAGCAGGC TTGCTGACGC CTATGGCCCG TGATCTTGGG
ATCAGCGAGG GAACAGCCGG ACAGGTCGTG ACTGCCACGG CTTTCGTGGG CGCCATCACG
GCCCTGTTGA GCAATGTCCT GATCGGCAGA TTAAACCGCA AGACAGTACT GGTCGGCCTC
AGTGGCTTGG CAATCGGCTC CAATATTCTT GCAGCGGTGG CGACGGACTT TTGGCTATTG
ATGCTCGGTC GGGCAGGCCT CGGCATTGCC CTCAGCGGCT TCTGGGCGCT TTCGGTTGCC
GTCGTCGCCA GGTTGGTTGG GGCCAATGCA ACAGGACGGG GCATGGCGAT CGTCACGCTC
GGCGTCTCAC TCGCAACGAT AGCCGCGCCA TCGATAGGCG CTTTGATCAG CGATTGGCTG
GGCTGGCGCA GCGCCATGTC GATGACCGCG GGACTTGCTG CAATTGCCAT GTTGCTACAG
GTAATCTGCT TGCCGACGCT GCCTGCAAGC ACAAGCAACA GTCTCTCTGA TGTTTTCCGG
CTGACGCGGC GGCGTGGCGT TCAACTTGGA ATGTTGGCCA TCCTTTTGTT GATGACGGGA
CATTTTGCCG GCTCGGTTTA TGTCCGTCCT TTCCTTGAAC AGGTGACCCT GCTTGAAACC
GGACCGATTG CCCTGACACT TCTCGGGTTT GGCGTTGCCT CGGTGATCGG TAACGTTGCG
GGTGGCCGGA TGGCGGACGC CAGTATTCAT ATGGCACTCG CTGTCACCGC CGCGCTGATG
GCATCTGCGG CGCTCGCCTT GGTGCTTTGG GGCAGTTATG TCGGCGTTGC CTTCAGCCTG
GTAACGCTTT GGGGCTTTGC CTTCGGCATG GCACCCGTGG TGCTGCCGAC CAACCTATCG
CGCAGCGCAC CTGACGCCCT GGAGGCAGCG GGCAGCCTGA TGGTCGTGTC TTTCCAGGTC
GCGATCACGA TTGGCGCGGT TGTCGGCGGC TATGTCGTCG ATCATTATGG CGCTGCGGGA
CCCTTGACCC TGACAGCCGC CCTGGCCGCA TTGACTGTTG TCTTGGCGCT GACGCAACCG
CGCAGCTGA
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| Protein sequence | MTDRTSQFNS AAIDLDTAEP VAWSPATWFA VLSMAATSFA LVSAEFLPAG LLTPMARDLG
ISEGTAGQVV TATAFVGAIT ALLSNVLIGR LNRKTVLVGL SGLAIGSNIL AAVATDFWLL
MLGRAGLGIA LSGFWALSVA VVARLVGANA TGRGMAIVTL GVSLATIAAP SIGALISDWL
GWRSAMSMTA GLAAIAMLLQ VICLPTLPAS TSNSLSDVFR LTRRRGVQLG MLAILLLMTG
HFAGSVYVRP FLEQVTLLET GPIALTLLGF GVASVIGNVA GGRMADASIH MALAVTAALM
ASAALALVLW GSYVGVAFSL VTLWGFAFGM APVVLPTNLS RSAPDALEAA GSLMVVSFQV
AITIGAVVGG YVVDHYGAAG PLTLTAALAA LTVVLALTQP RS
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