Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7352 |
Symbol | ych |
ID | 7380562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 331026 |
End bp | 331283 |
Gene Length | 258 bp |
Protein Length | 85 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641425 |
Product | hypothetical protein |
Protein accession | YP_002539722 |
Protein GI | 222102683 |
COG category | [S] Function unknown |
COG ID | [COG3831] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0982555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAG AGAACAACAG CCCGGTCCAA CTTCGCCGTA TCGACCCATC GCAAAACATG CGGCGCTTTT ACACGCTCGC ACTGCAACCG ACCCTGTTCG GCGGCGCCTC GGTGATCCGC AACTGGGGTC GGATTGGGAC GACAGGCCAG ACCCTGATCG AGACTTTCGA TCGAAAGGAG GATGCCCAGC GGGTGCTTTC ACGCCTGGAG CGGACGAAAA GAAAACGAGG TTACCATGAT GCGGGTCGTC TAACTTGA
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Protein sequence | MEKENNSPVQ LRRIDPSQNM RRFYTLALQP TLFGGASVIR NWGRIGTTGQ TLIETFDRKE DAQRVLSRLE RTKRKRGYHD AGRLT
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