Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7347 |
Symbol | |
ID | 7380558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 326373 |
End bp | 327335 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643641421 |
Product | ABC transporter membrane spanning protein (sugar) |
Protein accession | YP_002539718 |
Protein GI | 222102679 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTCA TCAGTCCGGT TCTATCTGGC GGCAGCGCCG AGAACGGCAA AGATGCGAGT TCGAAGCGCA GGGTGCGGAT TGTGTCCAAG CGCCGGCGGC GGATCGAAAA TGCGCTGATT GCCTATTCCT TCATTGCACC GAATTTCCTG GGCTTTGCCG TCTTCACGCT CGGTCCCATC CTGTTCGCCT TTGTGCTGGC TTTCATGCAT TGGGATGGGT CAAACCCGAT CACCTTTGCC GGGCTCGATA ATTTCTGGCG GCTGTTTGAA GACAAGACCT TTATCTCCGC CTTCTGGAAC ACGGTCATCT ATACTGTTAT CTCGGTGCCT GCGACGCTTG CCTGCGCGCT TGGCCTTGCC ATTCTGCTCA ACCAGAAAAT CCGTGGTCGC GATTTCTTCC GCACCGCGAT GTTCTTTCCC TATGTCGCGT CACTGGTCGC CGTGGCTGTC GTCTGGAACA TGCTGTTCAA CCCAGAAATG GGGCCGGTGA ACATGCTGCT CTACACGCTC GGCCTCGACC CCAATGACAT GCCCGGCTGG GCGGCTGACC GGCACTGGGC GATGGTCACC GTCATCCTGT TCGGTATCTG GAAGAGCATG GGCTATTACA TGGTCATCTA TCTGGCCGGG CTACAGGGTA TCAATGCCGA ATTATACGAG GCGGCCGGTC TCGACGGTGC CAATGGCTGG CAGAAATTCC GGCATGTCAC CGTGCCGCAG CTTGCCCCGA CGACGTTTTT CGTCACAGTC ATGCTGACGA TTCAGTCCTT TAAGGTGTTC GACCAGGTCT ATATGATCAC CCAGGGCGGA CCTGGAACCT CTACCCTCGT GCTGGTCTAT CATATCTATA ACGAAGCCTT CATTTCCTGG GATCTCGGCT ATTCCAGCAT GATTGCGCTG GTGCTGTTCT TCCTGGTTCT GGCGGTCACC GTGGTCCAGT TCCGTCGCCA GAGGGAGGAC TGA
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Protein sequence | MTVISPVLSG GSAENGKDAS SKRRVRIVSK RRRRIENALI AYSFIAPNFL GFAVFTLGPI LFAFVLAFMH WDGSNPITFA GLDNFWRLFE DKTFISAFWN TVIYTVISVP ATLACALGLA ILLNQKIRGR DFFRTAMFFP YVASLVAVAV VWNMLFNPEM GPVNMLLYTL GLDPNDMPGW AADRHWAMVT VILFGIWKSM GYYMVIYLAG LQGINAELYE AAGLDGANGW QKFRHVTVPQ LAPTTFFVTV MLTIQSFKVF DQVYMITQGG PGTSTLVLVY HIYNEAFISW DLGYSSMIAL VLFFLVLAVT VVQFRRQRED
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