| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7346 |
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| Symbol | |
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| ID | 7380557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 325533 |
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| End bp | 326369 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641420 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002539717 |
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| Protein GI | 222102678 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.477248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATTG CCGGACGCAG GATCAATGTC TCGACAATTG CCATCTACGC AACGGTCATC
GCCGTCACCA TCATCATGCT GCTGCCGTTT GCCTGGATGC TGTCGGCCTC GCTAAAGCTC
GACCGCGACG TTTTTGTCTT CCCGATCGAA TGGATACCGG CCCATCCGCG CTGGCAGAAC
TATGTCGATA TCTGGACGAA GATTCCGCTG GCCCTGTTCA TCTACAACAC CTCGAAGCTG
ACGATCATCG TCACGCTTTT GCAATTGTTG ACGTCGAGTT TCGCGGCCTA TGCTTTCGCC
AAACTGCATT TTCCCTTCAA GAACACGCTG TTTCTCGGCT ACATCGCCAC CATCGCCATG
CCCTGGCAGG TCTATATGGT GCCACAATTC CTGCTGATGC GGGAATTCGG GCTGAACAAC
ACCCATCTGG CACTGATCTG CTTGCAGGCG TTCACAGCCT TCGGCGTCTT CCTGATGCGG
CAGTTCTATA TGTCGATCCC GACAGAACTC TGCGAAGCCG CCCGGATCGA CGGGATGAAC
GAATACCAGA TCTGGGCGAA GATCATGCTG CCGCTGTCGA AGCCAGCGCT ATCGACTCTG
ACGATCTTCA CCTTCGTGAC CACATGGAAC GATTTTCTGG GGCCGATGAT CTATCTCACT
AAGACCGAAC TGAAGACCAT CCAGATCGGG CTTCGAATGT TCATATCGCA ATATTCCGCC
GAATACGGGC TGATCATGGC GGCGTCGGTC GTCGCGCTCA TTCCCGTACT GATTGTCTTT
CTCGCCTTGC AGCGCTTCTT TGTTGAAGGC GTCGCATCAA CCGGGCTGAA GGGGTGA
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| Protein sequence | MRIAGRRINV STIAIYATVI AVTIIMLLPF AWMLSASLKL DRDVFVFPIE WIPAHPRWQN
YVDIWTKIPL ALFIYNTSKL TIIVTLLQLL TSSFAAYAFA KLHFPFKNTL FLGYIATIAM
PWQVYMVPQF LLMREFGLNN THLALICLQA FTAFGVFLMR QFYMSIPTEL CEAARIDGMN
EYQIWAKIML PLSKPALSTL TIFTFVTTWN DFLGPMIYLT KTELKTIQIG LRMFISQYSA
EYGLIMAASV VALIPVLIVF LALQRFFVEG VASTGLKG
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