Gene Avi_7308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7308 
Symbol 
ID7380527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp276366 
End bp278633 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content61% 
IMG OID643641391 
Productpolyketide synthetase 
Protein accessionYP_002539688 
Protein GI222102649 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.39684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA ACGATACGTC CTGGACGCAA CGAACCTCGG AAAGTTCAGT GGATTTTATA 
TCTATAATTC ATATGCTTGA GCATCGTGCT CGGGATATGG AGGATGATGT GGCCATGCGC
TTCTTTCATG ATGACGCGGT CGCTGCGGCG CAGGCGAGGC CGGATTCCTG GACCTGGCGC
ATGCTTCGCG ATCGGGCGCG GCGTGTTGGT CAAGAGATTG CGCAGACAGG ACTTGTCATC
CCCGGCGCAC GTATTCTCGT GGTCTATCCG CCGGGCCTTA GCTTCATCGC CGCTTTCCTT
GGATGCCTTT ACGCAGGCAC TGTTCCCGTG CCCGTTCCGG CCCCGCGGCG TGCTGATGGA
ATCAATCGCT GGCTGCATAT CGCGCAGGAT GCCGGGATCT CCGGAATTCT CTGTGCCGAC
GACCTTCTGG ACGGGCTTCG CCCCCTTCAA CGGGCAGTCG GACATGGCTT TGCGCTCGCC
CCTAAAGCAG CCGATCCGGC GCGCCCGGTC GTCTTTGAAG ATGACGGCAG GCCATTCCAT
GCGCCGGAGG CAAAGCATGT CGCTTTCTTG CAATATACGT CGGGTTCGAC GAGCGATCCG
AAGGGGGTCA TGGTCACGCA TGGCAACCTG ATGGCCAATC TGCGGCAGAT CAGCACTGCC
TTCGAATACG ACCCATCCGA CATATCCGCC TGCTGGCTGC CGCACTATCA CGATATGGGG
CTGATCGACG GCATCCTGTC GCCGGTGTTC AACGGCTTTC CAGTGGCGCT GATGGCGCCT
GCCTCGTTCC TGCGCAGGCC TCTGCGCTTT CTGGAGCTGG CAAGCCATGT TCGCGCCACC
GTCATTGGCG GCCCGAATTT TTCCTACGAG CACTGCGTCG ATAAATATGC GCCGGAGGCG
GCCGCCGGAC TTGATCTCTC CAACGTCCGA ATCGCCTATA ACGGGGCCGA ACCGATCCGC
CCGAAGACGC TAGAGCGCTT CACCGCCGCC TTTGCGCCCC ACGGTTTCCA TAGTAGGGCC
TTTTATTGTT GCTACGGGCA GGCAGAAGCC ACGCTGTTCC AGACGGGTAA CAGTCCCGAC
GATCCACCGC TGATCCTGTC CGTCAGCCGC AAGGCGCTTG TCGAAACCGG GGCTGCGGTC
GAAGCGGATG ATGGCGACGA GCATGATAAG CTCGCCCTTG CCGCCTGCGG TCGCCCTGCC
GAGGGGCTTG ACCTTGCGCT TGTCGATCCC GAGGCGGGCC TGCGTGTGGA TGATGGCACG
GTCGGCGAGA TCTGGATTCG GGGTCCGAAC GTGACCCCCG GCTATTGGGG CCGCGCTAAA
CTGAACGCAG AGACCTTTGA TCAGGTGCTG GATGGATCGC GTGGTTGGCG CCGGACCGGT
GATCTGGGCT TTCGCCGCAA TGGGCAGCTC TACATCACTG GTCGGCTGAA AGACCTGGTG
ATCATCCGCG GGCAGAACCA TCACCCGGAA GATATTGAGC AATCCGTTTT CTCCAGCCAT
CCGGCGCTTG CACAAGGCCG GGCAGGGGTC TTTGCCATCG AGGTCGATGG CGAGGAGCAA
TTGGGCGTGG TCTGTGAGCT GACCCGCGAG GGCCTGCGCG ATCTTGATGG TGATGACGTC
ATCCGTGCCG TGCGCGGTGC CGTCTCGCGC AATCACAATG TCAGGGCCGC CGTCATTGCG
CTGCTGCGGC CGAGCAGTCT GCCACGCACG CCGAGTGGAA AAGTCCGCCG CTTCGCTTGC
CGACAGGGGA TCGTGACGGG GGATCTGCGC ATCGTTGCCC GCTGGGATGC AAAGCCGCAG
AGCGTGCTCA ATGCCCCGGC AATTGCCGAG CAACGAAGCT GGCGTGACCA GCTTCTGGAG
GTGCCCAAAG CTCTTCGCAA GGAAGCACTG CGGCATCTGC TGCGGCAGGA AGTGGCTATG
CTTGCCCGGC TGGGCGAAGG GGATTTGCCC GGAAATTCCG CTGGTTTCTT CGATCTTGGT
CTCGACTCTG TGGCGCTCGT CAATATCGGC GCTACGGTTG AGCGGGAACT CGGCGTGCCG
GTCCGGCCAA CACTGATTTT CGAACATCCC ACCATCCTGG CCCTTTCGGA CCATCTCTAC
GGCCTCATCG AAGACGATCA ATCGGAGACC GTGCCTCTTC AGGACGTAAA GCTCCAGAGC
AATGGGCCTG TGGCTCAGAC CCCGCCCGCG TTAGCATCTG GGTCTGCCTC TGTCGCCAGC
TCCGCTATTA CCTCGGAACT TGCTGCCCTG AAGGCATTGC TTCGCTGA
 
Protein sequence
MAVNDTSWTQ RTSESSVDFI SIIHMLEHRA RDMEDDVAMR FFHDDAVAAA QARPDSWTWR 
MLRDRARRVG QEIAQTGLVI PGARILVVYP PGLSFIAAFL GCLYAGTVPV PVPAPRRADG
INRWLHIAQD AGISGILCAD DLLDGLRPLQ RAVGHGFALA PKAADPARPV VFEDDGRPFH
APEAKHVAFL QYTSGSTSDP KGVMVTHGNL MANLRQISTA FEYDPSDISA CWLPHYHDMG
LIDGILSPVF NGFPVALMAP ASFLRRPLRF LELASHVRAT VIGGPNFSYE HCVDKYAPEA
AAGLDLSNVR IAYNGAEPIR PKTLERFTAA FAPHGFHSRA FYCCYGQAEA TLFQTGNSPD
DPPLILSVSR KALVETGAAV EADDGDEHDK LALAACGRPA EGLDLALVDP EAGLRVDDGT
VGEIWIRGPN VTPGYWGRAK LNAETFDQVL DGSRGWRRTG DLGFRRNGQL YITGRLKDLV
IIRGQNHHPE DIEQSVFSSH PALAQGRAGV FAIEVDGEEQ LGVVCELTRE GLRDLDGDDV
IRAVRGAVSR NHNVRAAVIA LLRPSSLPRT PSGKVRRFAC RQGIVTGDLR IVARWDAKPQ
SVLNAPAIAE QRSWRDQLLE VPKALRKEAL RHLLRQEVAM LARLGEGDLP GNSAGFFDLG
LDSVALVNIG ATVERELGVP VRPTLIFEHP TILALSDHLY GLIEDDQSET VPLQDVKLQS
NGPVAQTPPA LASGSASVAS SAITSELAAL KALLR