Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7298 |
Symbol | |
ID | 7380520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 255728 |
End bp | 263449 |
Gene Length | 7722 bp |
Protein Length | 2573 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641384 |
Product | peptide synthetase |
Protein accession | YP_002539681 |
Protein GI | 222102642 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720 [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC TTTTCGCCAA GATCGCCGGG CTTTCGCCGG AGCGGCGGGC GCTACTGGAA CAGAAGCTGA AAGCACAGGG CATCACGTTT CCCGCCCCCT CCGGCATTCA GCCACGGACA GACCGCGAGG CTGCGGTTCC GCTGTCATCG GCGCAAAAAC GCCTCTGGTT CATGCAGCAG CTGGAACCCG GCACCGTGGC CTACAATATG AACCTAGCAC TTCGGCTGAA AGGCCCGCTT GACCGCGCAG CCCTGTCTCG CGCCTATGCC GCCCTCATTG CGCGGCACGA ACCCCTGCGG ACGCGGTTTA CGATGGGCGA GGATGGCCAG CCGCAGCAAA TTGTCGAGGC ATCCGGCGCA GCCGATATAG GCTATCACGA TTGCCGACAG CATCCAGACC CGGAAAAGGA AGCCCGTCTT CAGCTCAAAG CATTTGTCGA GACGCCCTAT GATCTCACCC GCCCGCCGAT CCGCGCGACG CTGGTCGGGG TTCACGAGCA TGAGCATGTG CTGGCGCTTG GCATGCATCA TATCATCAGC GACCGCTGGT CGATGGGCGT CTTTGCCCGC GATCTCTCAA CGCTCTACCA TGCCGAAGCG ACGGGAACAG CAGCAGTGCT TGCGCCCCTT CCGGTGCAGT TTGCCGATTG GACGCTGTGG CAGCGCGACT TGCTGGACGG CCCCACTCTT GCCAACCAGC TCGCCTATTG GACAGAAAGC CTTGCGGGCG AGCTGCCGGT GCTGGAATTG CCATTGGACC GGCCACACAG CCTGACAGCG AGCTTCAGCG GCGCACACCT TCCCGTTTTG ATCGACCGGG GGCTGTCGCT CAGGCTGCGC GCACTTGCCG CCGAGCAGAA TGTCAGCCTG TTCACATTGC TGCTTGCCGC CTTCAACGTG CTTTTGCATC TCTATACCGA CAGCGACGAT ATCATCCTCG GCAGCGAGGT TGCCAACCGC GACCGGCCCG AGACGCAGAC CATGATGGGG CCGCTCGTCA ACACGCTTGT CTTTCGCAAC GACCTGTCCG GCGATCCGGC CTTTTTGGTT CTGCTCCAGA AGGTTGCCGA TGCTGTGCGC CGTGGCCTTG CCCATCAGGA TATCCCGTTC GAGCGCCTCG TCGAAGCAAT CAATCCAGAG CGCTCGCTCT CGGACCTGAA CCCGCTCTTC AACGTGAAAT TCGACATCCA GCACAGCGTT GCCCCGCCGC CGGGTCTGCA TGGACTGACG ATTGAAGCCT ATCCGCTGCG CGAAGTGGCA ACAAAATATG ACTTGCGCTT CAACCTTGAA GACGACCAGC CGGACATCAA GGGCAAGATC GAATATTCGA GCCAGATTTT CGACGAGAGC ACCATCGCCT CTATGCTTGC CCGTTTTGAG CGCCTGCTGG AGCTTGTGGT GCGCGAACCC TCGCGGCGGC TCTCCACGCT TTCGCTGCTG GCACCGGAGG AGGAAGCGGC CATCATCGCG GCGGGTTCCG GTCCCGTGCG GGATTATCCG GTTGAGGAAT GCCTGCATGA TCTCGTCCTG AAACAGGTCG AGCAAACGCC GGATGCGGAC GCGGTGACCG ATGGCGACCT CACCTGGTCC TATCGCGACC TCGAAGCGCA GTCTTCGCGC ATTGCCGCAA ATCTGGTTGC GGCTGGTGTG AAGCCCGGCG ACCGGGTGGG CATCTGCATG CGCCGCTCGC CCCGGATGAT CGCGGGTATC CTTGGCATCA TGCGTGCGGG TGCGGCCTAT GTGCCGCTCG ATGCCGATTA TCCGCCAAGC CGCCTTGTCT TCATTGCCGA GGATAGCGGG ATTACCATCC TGCTCGCTGA TCACCGCCCG GCCTTCGTCA CGCAGGCGCA AACGCTGCTT GACGTCACAA CATTGCCGGA CATCCGGCTG GAGGCGCGGC CTGCCGTCTC ACCGAACCAT CTCGCCTACA TCATCTATAC ATCCGGCTCG ACGGGCAGGC CCAAGGGCGT GGCGATAGAA CACCGCTCCG TCGTCGCCTT CATGTATTGG GCGCGGGAGC GCTTTACGCG CGAAGAGGTG GCGCGCATGC TGGTGCCGAC CTCGATCAGC TTTGACCTGT CGATCTTCGA ACTTTATGCG CCCCTCGTCC TCGGCGGCAC GCTCGTTGTC GCAGATCATT TTCTGGCACT GCCGCAGCTC GCAAGCAAGG TTGATGTGAC TTTCATCAAT ACGGTCCCCA GCCTCCTGCA AGAATTGCTG CAAGAACACA GATTGCCAGA CAGCGTACAG ACGGCAACCT TCTGCGGCGA GCCATTGCCA GCAGCACTCG TTGCCATCCT GAAACGCGAT TATCCGAACC TGCGTATCCT CAATCTCTAC GGTCCTTCGG AGGATACCTG CTTTTCAACG GAAGTTCCGT TGCAGGGCGA TCATTATCAG GGCGGCGTTG TGCCTATCGG CAAGCCATTG CCGAACACGC AAGCCTATAT TCTCGACCGT GCCGGCCGCC TGCGCCCGCC CGGCCTTTCT GGCGAGCTTT ATCTCGGCGG TACGGGCTTG GCGCGCGGCT ATTTTGGCCG ACCTGAGCAA ACCGCTGAGC GGTTCATTGC CAACCCGTTT TCGAGTGAGC CCGGCTCTCG TCTTTACCGG ACCGGGGATC GCATCCGCCG CCGCGCAGAT GGCAATCTGG AATTTTGCGG GCGGCTTGAC CATCAGGTCA AAGTGCGTGG CTTGCGCATC GAAACAGGCG AGATCGAGCA CAATCTCGAA CAGATGGAGG GCGTCGAAAA GGCGGTTGTG GCTGTCACGC AAGGCACTGA TCGGCAGCTG GCCGCCTTTA TCGAACCCCA AGACGGCGTG AGGCTGGATG AAACCGAGCT GCGCCGGGCG CTGTCCGAAG TCCTCCCCGT GCATATGGTG CCGACGCTGT GGTGCTTCCT GCCGCGCCTG CCGCAGCAGC CGAACGGCAA GATTGATCGC GCAGCACTGC CATCGCTGGC CGCAACAGTC GCCACCGGGT CCAGCCCGCC TGAGACCGAA ACGGAACAGC GTGTCGCTGA TGCCTGGGCT GATGTGCTGG CCATCGATTC GATCAGCCGG GACGACAATT TCTTCCGGCT CGGCGGCCAC TCGCTGCTGG CCATGCGCAT GATTACCCGG CTTTCGTCTT CGCTTCCGAC AAATGCCGTG CTGCGGAAGC TGTTTGAATT CCCCCGCCTC AAGGATTTCG CCGCAGCGCT TGAGCGTGAC GAGACGCCGA TGGCGGCACC CTCCAGCACC ATCGATGCCC TCCCGAATAG TGCGACGATA CCTTTGTCCT TTGCCCAGCA GCGGCTTTGG ACATTGGCCG AGCTGGAACC AGACAGCGCC GCCTACACTG TTCCTGCCGC GATCCGCTTT CATGGCGCGC TTGATCTGGA GGTGTTGCAA CACGCATTCA CAGCCCTTGC CGCACGCCAT CCGGCATTGC GCACGCAGAT CGTCAACCGC GATGGCAAAC CTGTGGTCGA GATCGGTGGA ACCAACGAGC CAGACATCGC AATCGTGGAT GTGAATGAGG CCACCCTGCC GGAAGTGCTG GCTGCTGCAT GCAGGCAGCC ATTCAACATG GCGACCGGTC CCCTCTTCCG CGCCCGAATT TTCCGTCTCT CCGCTGACGA GCACGTTGTT TTCGTCGCAC TCCACCACAT TGTCTCGGAT GCGCAATCGC TTCAGCTGAT GCTGCGGGAT CTGACGCGGT TCTATGATGC GGGCCGACAG GGCAAAGTGG CAGACCTTCC ACCGCTCACC CTGACCTATG GTGATTTTGC CGCTTGGCAG CGAAAGCAGC CGCTGGGCGA GCAGATCGAC TATTGGCGCC GCCAGCTGGA ACATGCCCCC CCGCTTCTGG AGCTGCCGAC GGATTTTCCG CGTGGTGCGC GGCAGGAATT CAAGGGCGGC AGCATTCCCT TCCATCTCGA TAGCGCGCTT ACAGCACGTC TGGTCAATTT TGCCCATGAG CGGGACGCCA CACCCTTCAT GGTGCTTCTC TCCGCCTTTT CGACCCTGCT GTCACGTTAT TCCGGCGCAT CCGATGTCGT CATCGGAACC CCGGTATCCG AACGGCCAAA CCGCGCGCTG GAGGATGTTA TCGGGCTGTT CGTCAACACG CTGGCGCTGA AACTGACGCA TGATGCTGCG ACAAGCTTCG AGCAGCAGGT CGCAGCCACA CGTTTGCTCG TCCTTGATGC CTTCCGCCAT CAAGACGCGC CGTTTGAATG TGTGGTCGAT GCCCTCTCGG TCGAGCGAAG CTGGAGCCAT AACCCTGTGT TCCAAGTGAT GGTCACCTGG CAAGCCGACG AGCAGCATAG CCCATGCCCC GATGACCTGA CGGTTACCCC GGTGGTGCTC GCACAGGAAA CATCGAAGGT CGATCTGACA CTTGACCTGC GCCATCGCGG CGACCAGTTT TCCGGCACCT TGATCTATCG CAGCGATCTC TTCCGCCAAG AGACGATCCT CCACATGGCC GAGGCTTTCA CGGCCTTGGT CGAGGCTCTT CTATCGGCCC CTGAGCGAGC ACAGATCGAA ATAGACGGCC TGCCCGAGCG CCAGCGCCAG CAGATCGCCA CATGGAACGC GACGGCAAAG ACCTATGATG CGGTGCCAGC AAGTCTGCAT GGCTTCTTTG CGCGTTCAAC CGAGCGCACA CCCGATGCCA TTGCCGTCAC AGATCGGAAC CGGAGCGTGA CCTATGCTGA GCTTGATCGG CAAGCAGAGG CGCTCGCCCG GCATCTCGCC TCCCTTGGCA TCGGACGCGG CAGTGCCGTC GGTATTTGCC TTGAGCGCAA CATCGACCTC ATTGCTTCGA TTCTTGCCGT CTTGAAGACG GGCGCTGCCT ATGTGCCGCT CGATCCCAAA TATCCGGCAG ATCGGATCGC CTTTGTCGCA AGGGATGCAA GCCTCTCCCT CATCTTGACA AAAGAAGAGC GCGCCGACTT CGCCGAGATC AAGACGCTTG ATCCGACCGC CGTCTGGAAC GGAACGCAGG CCGTCTCCGG GGCCCCTCTC CCCCATACGA CCGAAGGCAG CGATCTCGCC TATCTCATCT ACACCTCCGG CTCGACAGGG CAGCCGAAGG GGGTTGCAAT CGAACATCGC AATGCGGTTG CCTTCACACA TTGGGCGCTC GACACCTTCC CGGCGGAGAG CTTTGCCGGA ATGCTTGCGT CAACATCCGT CTGCTTCGAC CTGTCCATCT TCGAAATTTT CGTGACGTTC GCCGCTGGTG GGCGAATTTT CATCGTCGAT GATCTTTTCG AACTGCCGGA CGCGCACTTC GCAAACGAGG TCACATTCAT CAACACCGTG CCGACCCCGA TGACAGAACT CATGCGGTTT GGCCCGTTGC CAACCAAGGC AAAAACAGTC TGCCTTGCGG GCGAACCGCT GCCACCGAGC CTTGCACGCG CGATTCTGGA GACTGGACAG GTTGAGGCGC TGTACAATCT CTATGGGCCC TCCGAAGACA CGACCTATTC CACCGGATGC CGGATCGATG ACGCGGGGCT GCCCATCCAT ATCGGCAAGC CCATCACCAA CACCACCGCC CATGTCCTTG ACGCAGCACT CAATGAAGTG CCAATCGGCA TGCCGGGCGA GCTTTATCTG GCAGGCGAGG GTATCGCGCG CGGCTATCAC AATCGCCCGG ACCTGACGGC GGAGCGCTTC CTGCCAAACC CGTTTGACAG CACCGGCCAA GCCCCCCTGC TCTACAAGAC CGGAGACCGC GTTCGTCGGC TGGCCGATGG CAATCTCGAC TATCTCGGCC GAACTGATCG CCAGATGAAG ATCAGCGGTT TTCGGATCGA ACCGGGCGAG GTCGAGGCCG TGCTGATGCG CTATCCGGGC GTGACAGGAG CCGCCGTCGA TGCCTGGCGG GACAATACCG GCTATGCCCG CCTCGCCGCA TGGATTGAGG TGGCGGCACC TGTCGGTAAG GCAGCGCTCT CTGCCCATCT GAGCCGAGAA CTGCCGCGCC ATCTGGTGCC GACGTTTTTT GCGATGCTGG ACAAGCTTCC GCGCCTGCCG AACGGCAAGC TCGACCGCAA GGCCCTGCCC GATCCATCCG ATGAAGCCAA AACGCTTGCA GAAGACCAGA CGCCACACAA AGGCCATGAA GAGAAGATCG CCGCGATCTG GGCAAAACTT CTCGGACGCG AGGCGATTGG ACGCAACGAC AACTTCTTTG CGCTTGGTGG AGATTCAATT CTTGCTATTC AGGTCGTGGC TGCGGCGCGC CGCATTGGTA TTGCCATCAA ACCACGCGAT ATTTTCCAAT ATTCAACGCT TGCAGCCCTT GCCGCATCCG TCTCGGATCT GGCGACAGAG TTGCATGAAA CCGGACCAAT GAGCGGCGAC ATTCCGCTTG GCCCGGCCCA GCACTGGTTT TTTGAGCAGA ATTACCCTGA TATTGCCCAT TGGAATCAGG CATTGATGCT GAGGCCCCGC AGGGTGATCA ATGAGAAGAC GCTTCAGCAG GCTATGGACC TTCTCCACCA GACCCATGAT GCGCTGCGCG GCCGTTTCTG GCAGCAAGAC GGACAGTGGC GACAATCCGT GACGGAGCTG GAAGGGGCAC CGCCGCTGCG TTCCACCTCT TGTACAGCAA CCGAAGCGGA TGCCGTGCTC TTGGTTGAGG CGAATGCGCT GCAACGCCGT TTCGATCTCA CTGATGGCCC GGTTTGGGGT GCCACGCTTG TGACCATCGA CGGGTGCGAG CAACGGCTGC TGATCGCAGC GCATCATCTC GTGATCGACG GGGTGTCCTG GCGCATTCTC CTTGATGACC TTCAAACATG CCTGACAGCG TTTGAGGCCG GTCTTGAGAT GAGCTTGCCG CCCCGCACAA CAGGGATTGA TACCTGGGTG CGCGAGCTGA AAGACAGCGC GGTGTTCGAT GGTGAAAAGG ACCATTGGCG CACGATAACC GAGGCCAAGA CCGCAGCGAT CCCGACGAAC CGTTCGGGCA GCAATTGCGC TGGCGACACC GACATCGTTG ATCTGACAAT CGATCCTGAC CTCACCGGAC GCCTTCTTCG AGACGTGCCG TCCTGCTATC CAATCGATGC CGAAGAAATC ATGCTTGCGG CACTTTATAA TGCAATCCGC GATTGGACCG GACACGACAG GCTCCGGCTG ATCCTTGAAA GTCATGGCCG GGCAGACCTG TTCGAAGGCG TCGATCTGAG CCGCTCCGTC GGTTGGTTCA CAGGCCTTTA TCCCGTTCTC TTCGATGTCA CCGGGCGCGA CAGGCGCACC ACATTGCTCT CGGTCAAGGA AAGTCTCCGC CGTGTTGCAA ACGACGGCAT CGGCTATGGC GTTCTGAAAT ATCTGAAGGG CGTGGCATTG CCACAGCTGG AGGATATCGC CGAGATACGG TTCAACTATC TTGGCCAGAC GGACACGTTG TTTTCCGGCG ATGCGTTGCT GTCACGCGCA GCCGAGCCAT CGGGCGATCC GCGTGGCGCG CGCAATGGGC GCGGGGTGCT CCTTGATATC AATGCAATCA TAAGCGGCGG GCATTTGCGC ATTCGCCTTG CCTATTCCCG GCAGATTCAT GATCGGCAGA CAATCGAAAC ACTCGCGGCG GGGCTGCAAA ACCATCTCGA AAGCCTTGTC GATTTCTGCC TGACATCAAC CGAAGCCGGC TACACACCAG CAGACTTCAA GCACATGACA CTTGATCAGG ATGATCTCGA AGCCATCCTG CGCAATCTCT GA
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Protein sequence | MNELFAKIAG LSPERRALLE QKLKAQGITF PAPSGIQPRT DREAAVPLSS AQKRLWFMQQ LEPGTVAYNM NLALRLKGPL DRAALSRAYA ALIARHEPLR TRFTMGEDGQ PQQIVEASGA ADIGYHDCRQ HPDPEKEARL QLKAFVETPY DLTRPPIRAT LVGVHEHEHV LALGMHHIIS DRWSMGVFAR DLSTLYHAEA TGTAAVLAPL PVQFADWTLW QRDLLDGPTL ANQLAYWTES LAGELPVLEL PLDRPHSLTA SFSGAHLPVL IDRGLSLRLR ALAAEQNVSL FTLLLAAFNV LLHLYTDSDD IILGSEVANR DRPETQTMMG PLVNTLVFRN DLSGDPAFLV LLQKVADAVR RGLAHQDIPF ERLVEAINPE RSLSDLNPLF NVKFDIQHSV APPPGLHGLT IEAYPLREVA TKYDLRFNLE DDQPDIKGKI EYSSQIFDES TIASMLARFE RLLELVVREP SRRLSTLSLL APEEEAAIIA AGSGPVRDYP VEECLHDLVL KQVEQTPDAD AVTDGDLTWS YRDLEAQSSR IAANLVAAGV KPGDRVGICM RRSPRMIAGI LGIMRAGAAY VPLDADYPPS RLVFIAEDSG ITILLADHRP AFVTQAQTLL DVTTLPDIRL EARPAVSPNH LAYIIYTSGS TGRPKGVAIE HRSVVAFMYW ARERFTREEV ARMLVPTSIS FDLSIFELYA PLVLGGTLVV ADHFLALPQL ASKVDVTFIN TVPSLLQELL QEHRLPDSVQ TATFCGEPLP AALVAILKRD YPNLRILNLY GPSEDTCFST EVPLQGDHYQ GGVVPIGKPL PNTQAYILDR AGRLRPPGLS GELYLGGTGL ARGYFGRPEQ TAERFIANPF SSEPGSRLYR TGDRIRRRAD GNLEFCGRLD HQVKVRGLRI ETGEIEHNLE QMEGVEKAVV AVTQGTDRQL AAFIEPQDGV RLDETELRRA LSEVLPVHMV PTLWCFLPRL PQQPNGKIDR AALPSLAATV ATGSSPPETE TEQRVADAWA DVLAIDSISR DDNFFRLGGH SLLAMRMITR LSSSLPTNAV LRKLFEFPRL KDFAAALERD ETPMAAPSST IDALPNSATI PLSFAQQRLW TLAELEPDSA AYTVPAAIRF HGALDLEVLQ HAFTALAARH PALRTQIVNR DGKPVVEIGG TNEPDIAIVD VNEATLPEVL AAACRQPFNM ATGPLFRARI FRLSADEHVV FVALHHIVSD AQSLQLMLRD LTRFYDAGRQ GKVADLPPLT LTYGDFAAWQ RKQPLGEQID YWRRQLEHAP PLLELPTDFP RGARQEFKGG SIPFHLDSAL TARLVNFAHE RDATPFMVLL SAFSTLLSRY SGASDVVIGT PVSERPNRAL EDVIGLFVNT LALKLTHDAA TSFEQQVAAT RLLVLDAFRH QDAPFECVVD ALSVERSWSH NPVFQVMVTW QADEQHSPCP DDLTVTPVVL AQETSKVDLT LDLRHRGDQF SGTLIYRSDL FRQETILHMA EAFTALVEAL LSAPERAQIE IDGLPERQRQ QIATWNATAK TYDAVPASLH GFFARSTERT PDAIAVTDRN RSVTYAELDR QAEALARHLA SLGIGRGSAV GICLERNIDL IASILAVLKT GAAYVPLDPK YPADRIAFVA RDASLSLILT KEERADFAEI KTLDPTAVWN GTQAVSGAPL PHTTEGSDLA YLIYTSGSTG QPKGVAIEHR NAVAFTHWAL DTFPAESFAG MLASTSVCFD LSIFEIFVTF AAGGRIFIVD DLFELPDAHF ANEVTFINTV PTPMTELMRF GPLPTKAKTV CLAGEPLPPS LARAILETGQ VEALYNLYGP SEDTTYSTGC RIDDAGLPIH IGKPITNTTA HVLDAALNEV PIGMPGELYL AGEGIARGYH NRPDLTAERF LPNPFDSTGQ APLLYKTGDR VRRLADGNLD YLGRTDRQMK ISGFRIEPGE VEAVLMRYPG VTGAAVDAWR DNTGYARLAA WIEVAAPVGK AALSAHLSRE LPRHLVPTFF AMLDKLPRLP NGKLDRKALP DPSDEAKTLA EDQTPHKGHE EKIAAIWAKL LGREAIGRND NFFALGGDSI LAIQVVAAAR RIGIAIKPRD IFQYSTLAAL AASVSDLATE LHETGPMSGD IPLGPAQHWF FEQNYPDIAH WNQALMLRPR RVINEKTLQQ AMDLLHQTHD ALRGRFWQQD GQWRQSVTEL EGAPPLRSTS CTATEADAVL LVEANALQRR FDLTDGPVWG ATLVTIDGCE QRLLIAAHHL VIDGVSWRIL LDDLQTCLTA FEAGLEMSLP PRTTGIDTWV RELKDSAVFD GEKDHWRTIT EAKTAAIPTN RSGSNCAGDT DIVDLTIDPD LTGRLLRDVP SCYPIDAEEI MLAALYNAIR DWTGHDRLRL ILESHGRADL FEGVDLSRSV GWFTGLYPVL FDVTGRDRRT TLLSVKESLR RVANDGIGYG VLKYLKGVAL PQLEDIAEIR FNYLGQTDTL FSGDALLSRA AEPSGDPRGA RNGRGVLLDI NAIISGGHLR IRLAYSRQIH DRQTIETLAA GLQNHLESLV DFCLTSTEAG YTPADFKHMT LDQDDLEAIL RNL
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