Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7263 |
Symbol | |
ID | 7380489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 218712 |
End bp | 219026 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641353 |
Product | transposase |
Protein accession | YP_002539650 |
Protein GI | 222102611 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGTGA GAACGGACCT TGTTCCAGCC CCCTATGGCG CGGCAAAGCG CGACATCATG CCCGACGTCG AGCATCGCTC GCACAAAGGA CTGAACAATC GGGCGGAGAA TTCCCATCAA CCGACCCGGC GACGAGAACG GATCATGAAG GGCTTCAAAT CAGCGCGACA TCTCCAGCGT TTTGTTTCAA TTCATGACCC TGTCGCCAAC CTTTTTCACA TTCCACGCCA CGAGATCTCA TCAGACAATC ATCGCGAACT GAGAACCCGA GCCATGCAGA TGTGGAACGA AATCGCATGC CTGCAAACCG CATAA
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Protein sequence | MFVRTDLVPA PYGAAKRDIM PDVEHRSHKG LNNRAENSHQ PTRRRERIMK GFKSARHLQR FVSIHDPVAN LFHIPRHEIS SDNHRELRTR AMQMWNEIAC LQTA
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