| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7203 |
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| Symbol | |
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| ID | 7380363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 170635 |
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| End bp | 171681 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641311 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002539608 |
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| Protein GI | 222102569 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0566155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCG AACAGACAAC CACCCTTGGC CCGGCCACTC ATACTAATGC CACTCATAGT
CAGGTCCCCA CTACTTGGCG TTCAAGCCGG TTCCGGCTCA GACGCAGCAG TCTGACCGGG
CAGATCCTGA CGCGGATTGG CTCTGGTTTG CTGGTGTTGT GGGCGGCGGT GACGTTGAGC
TTCATCAGCC TGCATCTGGC TCCCGGCGAT ATTGTCAGCC TGCTGATTGG CGAACAGCTG
CGCACGCCGG AAGTGGAGGC CGCTATTCGC GCCGAGTGGG GGCTGAATGA TCCCGTGTAT
GTGCAATATA TCCATTATCT GGGCCGGGTT CTGCATGGTG ATTTCGGGCG GTCCTACATT
TTGCAAACCG ATGTTTCCGG TCTGGTGTTG TCGCAGATCT TGCCAACCCT GAAATTAACG
GCAGCAGCGC TCACGGTCGC CATTGTGTTT GCCGTCACCA TTGCTGTGCT GACGGCAGCC
AAACGGGTGC CGCGCATCAT CGCTGGTGGG TTGGAATTGC TGCTGATTTC CACGCCATCC
TTCTGGCTCG GCATCCTGCT GTTGTTTGTG TTTTCCTTCA CGCTGAAACT GTTTCCAGTC
TCTGGCGACA GGAGCTTTTC GGCGCTGGTG CTTCCAGCCT TCGCCCTCGG TCTGCCGCTG
GGGGCGGTGA TTGCGCAGGT GTTGCGTGAG GGATTGGAGC GGGCGCTGGA AGAACCCTTT
GCCTTGACGG TGCGCAGCTG GGGCACACAC AGCCTTGTGC TGCGGTTGCG CCACGCGCTT
CGCCATGCGG CCCTGCCAGC GGTAACGCTC ACCGGCTGGC TGGTTGGCAA TCTCTTGTCG
GGTGCGGTCA TTACCGAATC CGTGTTTGGC AGGCCGGGGT TGGGGCGTGT CACGGTCAAT
GCCGTTCTCG CCCATGACCT GCCCGTGGTG CTGGCGGTGG CCATTCTCTC GGCCTTTGTC
TATGTGGTGT TGAGCACGGC GGTGGATGTG CTCTATCTGC GGCTTGATCC ACGGTTGCGA
ACGAAGGCGC GGGAGGATGC GCGATGA
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| Protein sequence | MDAEQTTTLG PATHTNATHS QVPTTWRSSR FRLRRSSLTG QILTRIGSGL LVLWAAVTLS
FISLHLAPGD IVSLLIGEQL RTPEVEAAIR AEWGLNDPVY VQYIHYLGRV LHGDFGRSYI
LQTDVSGLVL SQILPTLKLT AAALTVAIVF AVTIAVLTAA KRVPRIIAGG LELLLISTPS
FWLGILLLFV FSFTLKLFPV SGDRSFSALV LPAFALGLPL GAVIAQVLRE GLERALEEPF
ALTVRSWGTH SLVLRLRHAL RHAALPAVTL TGWLVGNLLS GAVITESVFG RPGLGRVTVN
AVLAHDLPVV LAVAILSAFV YVVLSTAVDV LYLRLDPRLR TKAREDAR
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