| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7191 |
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| Symbol | |
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| ID | 7380351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 156158 |
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| End bp | 157852 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641299 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539596 |
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| Protein GI | 222102557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.453207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT CTTTATCCAA AACAAAACCC GTTCTGCGTA TCAATAGTCT GAGCGTGGAT
TTTCCCGGTT TTGATGGCAA TTTTCGTGCA GTCGATGACC TATCGCTCAC CATTGCCCGT
GGCGAAGTGC TGGGCGTGAT TGGCGAATCC GGCGCTGGCA AATCCATGAC CGGAGCTGCG
ATCATTGGCC TGATTGATCC CCCCGGCCGC ATCACCTCTG GCGAAATCCA CCTGCAAGGC
GAGCGGATTG ATAACCTCGG TGACAAAGCG CTGGAAACTT TGCGCGGACG GCGGATCGGC
ACCGTGTTTC AAGACCCGCT GGTCAGCCTC AATCCGCTTT ACACCATTGG TCAACAGCTG
ATTGAAACCA TTCGCCGCCA CCTGCCGCTG GATCAGGGGC AGGCGCGGCA AAGGGCGATA
GACCTGTTGC GTGAGGTGGG TATTGATGAG CCAGCACGGC GGCTGGATGC CTATCCGCAT
GAATTTTCCG GTGGAATGCG CCAACGGGTG GTGATTGCGC TGGCCGTGGC CGCCGATCCC
GACCTGCTGA TTGCCGATGA GCCGACCTCG GCATTGGATG TGTCCGTGCA GGCGCAGATT
ATTGCGCTGC TTAAGTCTCT TTGCCAGCGG CGCGGGCTGG CTGTTCTGCT GATCACCCAC
GACATGGGCG TGGTCGCGGA AATCGCCAAC CGCGTTGTGG TGATGCACAA GGGCCGGATT
GTGGAAAGCG GGTCCGTGGC TGAGGTGATT GGCAGTCCCA AGCATGATTA CACCCGGGCG
CTGATTGCCG CCATCCCTTC GATTAGGCGT AAAAACACGC GGGCCTCGGT GGCATCCAAA
GGGGATTTGG TCAAGGTGGA AGGCTTGATC CGCGATTTTG CCCTGCCGGG TGGCGGTGGC
CTGCCGTTTT TCAGCAAAAA TCGAAAGCAG CGCAGTCTTC GCGCCGTCAA TGATGTCAGT
TTTTCGATTG GCGAGGGCCA GACCTTTGCG CTGGTGGGCG AATCCGGTTC TGGCAAGTCC
ACCATTGCCC GCATTGTCGT GGGCCTTCTC GGCGCACAAG CGGGCAAGGT CACCATCGGC
GGTACGGTGT TGGGGCAGGA TAAGGCCCCC GCCCTGAAAG GCGCTGTGCA GATGATCTTT
CAAGATCCCT ATGCCAGCCT CAACAGCCGT TGGCGGATTG GTGACATTAT TGCCGAACCC
ATCCGAACCC TTGGCCTGGA AACAGACAAT CGCGTGATTG AGCAGCGTGT TACAGATCTT
CTGGAAAAAG TCCGGCTTGA TCCCGATGCG CGCAGCCGCT TTCCCCATGA GTTTTCCGGC
GGGCAACGCC AGCGCATAGC CATTGCTCGC GCCCTTGCCA GCCGCCCGCG CTTCATTGTG
TGTGATGAAC CAACCTCGGC GCTGGATGTG TCGGTGCAGG CACAAGTGCT GGAGTTGATG
GCTAGCCTGC AAGCAGAATT CGGCCTGACC TATCTGTTGA TCAGCCATAA TCTGGCTGTT
GTGCGGCAAA TGGCAGACCG GGTTGGCGTG TTGAAAAACG GTGTTCTGGT GGAGGAAGGG
CCTGTCGAGG AGGTGTTCGA ACGTCCTCAG CATGACTACA CCCGAATGTT AATCGCAGCC
GTCCCCGACA TCGATGATAG TGTCGTGCCA TCAACAGATG TCAAACAACG TCCAAAAGTC
TTATCCGATC ATTGA
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| Protein sequence | MSLSLSKTKP VLRINSLSVD FPGFDGNFRA VDDLSLTIAR GEVLGVIGES GAGKSMTGAA
IIGLIDPPGR ITSGEIHLQG ERIDNLGDKA LETLRGRRIG TVFQDPLVSL NPLYTIGQQL
IETIRRHLPL DQGQARQRAI DLLREVGIDE PARRLDAYPH EFSGGMRQRV VIALAVAADP
DLLIADEPTS ALDVSVQAQI IALLKSLCQR RGLAVLLITH DMGVVAEIAN RVVVMHKGRI
VESGSVAEVI GSPKHDYTRA LIAAIPSIRR KNTRASVASK GDLVKVEGLI RDFALPGGGG
LPFFSKNRKQ RSLRAVNDVS FSIGEGQTFA LVGESGSGKS TIARIVVGLL GAQAGKVTIG
GTVLGQDKAP ALKGAVQMIF QDPYASLNSR WRIGDIIAEP IRTLGLETDN RVIEQRVTDL
LEKVRLDPDA RSRFPHEFSG GQRQRIAIAR ALASRPRFIV CDEPTSALDV SVQAQVLELM
ASLQAEFGLT YLLISHNLAV VRQMADRVGV LKNGVLVEEG PVEEVFERPQ HDYTRMLIAA
VPDIDDSVVP STDVKQRPKV LSDH
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