Gene Avi_7163 details

Gene Information

• Locus tag: Avi_7163
• Symbol: tauA
• ID: 7380329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 131638
• End bp: 132648
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643641277
• Product: taurine ABC transporter periplasmic binding protein
• Protein accession: YP_002539574
• Protein GI: 222102535
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4521] ABC-type taurine transport system, periplasmic component
• TIGRFAM ID: [TIGR01729] taurine ABC transporter, periplasmic binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTA AAAAACTCGT CACATTTGCA TTGGCATCCG TTGGCATTGC CCTTGTCGCG 
CTTCCAACAT TTGCTGCTGA CAAAAAGGTG GTTGTTGCCT ATCAGACCGA TGCGCTTCCG 
TCTTCGGTGG CGATTGCCAA TGGCGAATTG GCCAAGGCAA CGGGCTATGA CATCGATTTC 
CGCAAGTTTA ATTCCGGCGC AGAAATTTTT GCAGCTATTG CCTCCGGCGA TGTCCAGGTC 
GGTTATGTTG GCTCCAGCCC GTTTGCGGCT GCGACATCGC GTGGCCTTGA TGTCAAGGCC 
TTCTATCTGG CATCGATTTC CGGAACGGAT GAAGCGCTTG TGGTGCGCAA TGGGTCCGGA 
ATCAATTCTG TCAACGACCT GAAAGGCAAG AAGCTGGCGG CAGCGCCCGT GTCCACCGAC 
CATTACCAGC TGTTGGCGCT GATCAAATCC TTGGGTTTGA GCGAAAAGGA TGTGCAGGTG 
TTTGCCATCC CGCAGCCGGA AATTGTTGCC AGCTATAATC GCGGCGACAT TGATGGCGGG 
TTTGTCTGGG ACCCGGCGCT GACCGAACTC AGCAAGAATG GCAAGGTGCT GGTGACATCC 
AAGGATGTTG CAGAAAAGGG CGCTCCCACA TTTTCCGCCT GGGTGGCCGC TGGAAAATTT 
GCCAAGGCCA ATCCTGATTT TCTGAAAGCC TATGCGGGCG TGATCAACAA ATATTACGCC 
TCCTTCGCCA AGGACAAGAG CGCATGGGGT GCCGATAGCG ACAATGCCAA GCAGTTGGCC 
AAACTGCTGG GTGGCACAGC CGAACAACAG GCTGCCGCCT TGAAGAACCT CAACCTGCTG 
ACACCTGAGG TGCAGGCTTC TGCTGCATGG TTGGGTGGCG GTGAGAATTC CGGTGCCGCC 
AAGATCCTCA AAGACACAGC ACAATTTCTG AAGGCACAGG GCAAGATTGG CGATGTGCTG 
CCGAGCTATG CCGCATTTGT CACGCCAGAG GCGCTGCAAG TCACCAATTG A 

 

Protein sequence

MSLKKLVTFA LASVGIALVA LPTFAADKKV VVAYQTDALP SSVAIANGEL AKATGYDIDF 
RKFNSGAEIF AAIASGDVQV GYVGSSPFAA ATSRGLDVKA FYLASISGTD EALVVRNGSG 
INSVNDLKGK KLAAAPVSTD HYQLLALIKS LGLSEKDVQV FAIPQPEIVA SYNRGDIDGG 
FVWDPALTEL SKNGKVLVTS KDVAEKGAPT FSAWVAAGKF AKANPDFLKA YAGVINKYYA 
SFAKDKSAWG ADSDNAKQLA KLLGGTAEQQ AAALKNLNLL TPEVQASAAW LGGGENSGAA 
KILKDTAQFL KAQGKIGDVL PSYAAFVTPE ALQVTN