| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7160 |
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| Symbol | |
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| ID | 7380326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 127916 |
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| End bp | 129265 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641274 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539571 |
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| Protein GI | 222102532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.108123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGA TATTTTTGCG AAATGCCCTT GCTGTCGCAG CATCGGCTTT TGTCTTCGCA
AGCGCTGCAC AGGCCATTGA GACGACGCCG GGACCAGATA GCAACAAGCA GTTTTTCCCA
ATCGCCAGTT TTCGCGTCGG TCCTTATGCG GCCTCCGGTG CATCCATCTG GGCGGGACGT
ATCGATTACT ATCGCTATAT CAACGAGGTG GAAGGCGGCA TCAATGGTGT TCCCATCGTC
TGGCAGGAAT GCGAAACGGA GTGGACCGCC GAAAAGGGTA TTGAGTGCTA TGAACGTTTC
AAGCGCGGCC TGAATGGCGC GCCGATTTCC GCCTATTTCC CCAATGGTGC TCCGGCAGCC
TATGCTCTGT CTGATCGCGC CACCAAAGAC AAGATTCCGC TGGTAACTCT GGCCTATGGC
CGCACAGAAG CCACCGATGG CCGCGTCTTT CCTTACAATT TCCCCGTGAT GGTGACCTTC
TACAGCGAAG CCTCAGCGGT GGTGAATTAT ATTGCCCAGC GTGAGGGCGG GTTTGACAAG
CTCAAGGGCA AGAAGATCGC CACTGTCTAT CATGACAGCG CCTATGGCCG CGAAACCCTT
GATCCGCTGG CGCTGCTGGC CAAGAAATAT GGTTTTGAAA ACATCCAGAT TCCGGTTGCC
GATCCCGGCA GCGAGCAATC ATCACAATGG CGGCAGGTGC GCGAGCAGAA GCCGGATTGG
GTTTTTCTGC GCACATGGGG CGTGTCCACG CCCGTTGCCA TCAAGACCGC CCAGCGCTTC
GGTTTCCCCG CTGATCATGT GATTGGCGAT GTTTGGGCTT CGTCCGAAGA GGATGTGATT
CCGGCAGGGG ATGCCGCCAA GGGGTATCTC GCTCTGACAC CATACCCAGC AGGTGCGGAT
TTCGACATCC ATAAGCGTCT GAAGCAATCT ATCATCGACA CGGGCAAATC GGACCTGCGC
GACACCAAGG CTTTTGGCAG CGTCTATTAC AATTCCGGTC TGGTGGATGC GCTGATTTCG
GTCGAAATCG TGCGACAGGC GCAGGCCAAA TTCGGCAACC GCCCGATCAC CAGCGAAGAG
GCACAGTGGG CTCTGGAACA TTTCAAGCTC GATGATGCCG CGCTGAAAAA GGCAGGCTTC
CTTGGCCTTG TGCAAAACCT GCAACTGACA CCCGCCGATC ACGAGGGTGG CGGTGCCGTG
CGCGTGCAGC AATGGAATGG TAAAAACTGG ACGCTGATCA GTGACTGGGT GCAGGCGGAT
CGCCAAACCC TTCGCCCGCT GATTGACGCG AAATCCGCAG CCTATGCCAA GGAAAACGGC
ATTACCCCGC GGGATGTTGG CACCAACTGA
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| Protein sequence | MFKIFLRNAL AVAASAFVFA SAAQAIETTP GPDSNKQFFP IASFRVGPYA ASGASIWAGR
IDYYRYINEV EGGINGVPIV WQECETEWTA EKGIECYERF KRGLNGAPIS AYFPNGAPAA
YALSDRATKD KIPLVTLAYG RTEATDGRVF PYNFPVMVTF YSEASAVVNY IAQREGGFDK
LKGKKIATVY HDSAYGRETL DPLALLAKKY GFENIQIPVA DPGSEQSSQW RQVREQKPDW
VFLRTWGVST PVAIKTAQRF GFPADHVIGD VWASSEEDVI PAGDAAKGYL ALTPYPAGAD
FDIHKRLKQS IIDTGKSDLR DTKAFGSVYY NSGLVDALIS VEIVRQAQAK FGNRPITSEE
AQWALEHFKL DDAALKKAGF LGLVQNLQLT PADHEGGGAV RVQQWNGKNW TLISDWVQAD
RQTLRPLIDA KSAAYAKENG ITPRDVGTN
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