| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7158 |
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| Symbol | |
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| ID | 7380324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 125455 |
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| End bp | 126507 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641272 |
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| Product | ABC transporter membrane spanning protein (branched chain amino acid) |
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| Protein accession | YP_002539569 |
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| Protein GI | 222102530 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.258104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACC TTGAATTGCC GTTGGTGACC CATCCCGTGC AGAACATTGG CCTGAAGGCT
GTGGGCCTTG TGGCACTTGT TATCCTGCTG TTGGCTGCTC CCTTTCTGAC CTCTGAATAT
TGGATCAATG CCATCATTGT GCCCTTCCTG ATCCTGTCGC TTGCAGGGTT GGGGCTGAAC
CTTCTCACCG GTTATGCGGG GCAATTGTCT CTGGGCGCAG GCGCTTTCAT GATGGTGGGG
GCCTATGCAA CCTTCGCCTT CCAGCTTCGG GTTCCAGAAT TGCCCTTGCC GCTGGCGCTG
ATCATCTCCG GCCTGATTTC TGGCGTGGTT GGCTTGGCCT TTGGCCTGCC CTCCACGCGC
ATCAAGGGCT TTTACCTGAT TGTCAGCACA CTCACGGCGC AGTTCTTCTT TGAGTGGTTG
TTTTTGAAAT TTCCGTGGTT TTACAATGGC AATTCATCCG CAACCATTGC CCTGCCGCAT
GGACTTTCCG TGTTTGGGCT GGATCTCAAC AATCCCCACG GTCGGTATTT TCTCACCCTT
GGCAGTGTGG CATTGCTGAC CTGGCTGTCG TTCAATCTGG TGCGCAGCCA GACAGGCCGC
AACTGGATGG CCATCCGCGA TATGGATACG GCGGCAGCCG TGATTGGTGT TCCCACCTTC
CGCGCCAAGC TGCAAGCTTT CGCGGTGTCC AGTTTCATCC TTGGTATTGC CGGTGCGCTG
TGGGCCTTTA CCTATCTCGG ATCGGCCAGT GTTCAGAGTT TTGGCCTCAC CCGTTCTTAC
CAGATCCTCT TCATCATCAT TATCGGTGGC CTTGGCACCA TCAGGGGTGC CTATCTGGGG
GCGGCTTTCG TCAGTCTGCT GCCTTTGGCG CTCGATTGGC TGTTTCAATA TCTGTTCAGC
GGCCATGTGG ATGCAGGGCT GCTGCAAAAT ATCCAGAAGG CAATCTTCGG CATTCTCATC
ATCTGGTTTC TGATCAAGGA ACCTGAGGGT CTGTCGCGCC TGCTCGGTTT GCGGCGTGCG
CATGGCGCAC GTCGGCGTCT CTTTCCCTCC TAA
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| Protein sequence | MTNLELPLVT HPVQNIGLKA VGLVALVILL LAAPFLTSEY WINAIIVPFL ILSLAGLGLN
LLTGYAGQLS LGAGAFMMVG AYATFAFQLR VPELPLPLAL IISGLISGVV GLAFGLPSTR
IKGFYLIVST LTAQFFFEWL FLKFPWFYNG NSSATIALPH GLSVFGLDLN NPHGRYFLTL
GSVALLTWLS FNLVRSQTGR NWMAIRDMDT AAAVIGVPTF RAKLQAFAVS SFILGIAGAL
WAFTYLGSAS VQSFGLTRSY QILFIIIIGG LGTIRGAYLG AAFVSLLPLA LDWLFQYLFS
GHVDAGLLQN IQKAIFGILI IWFLIKEPEG LSRLLGLRRA HGARRRLFPS
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