Gene Avi_7154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7154 
Symbol 
ID7380190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp121123 
End bp121797 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content55% 
IMG OID643641268 
Producttransposase 
Protein accessionYP_002539565 
Protein GI222102526 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGAATGCCA TTACCGAGAA GCTGAAACGC CAATCGAAAG ACGATTTCAA GGGACGACAT 
TTTGAGGCGT GGCTGATCGT GCAGGCGGTT GCATGGTATT TGCGTTATCC GCTCAGCTAT 
CGCGATTTGG AGGAAATGTT CCGGGAACGC AGTTTCGAGG TTGACCATAG CACGATCAAC 
CGCTGGGTTC TGGCCTACGC ACCGATGATC GAGAAGCGGT TACGTCAGTT TCGTCGGCCA 
CATTGCGGCT CGGTTCGCGT CGATGAGACC TACGTCAAGA TCCGCGGCAA GTGGCGATAC 
GTGTATCGCG CAATCGGCAA GCACGGAAAT CCCGTCGACT TCCTGCTGAC GGCAAAGCGC 
GATCTTGATG CCGCCAATAC GTTTCCGTCG GCGATCAAAA CATCGGTCGA TAGCGGGCTG 
TTGCATCCAG ATCCTGTGCA CTATGCCACC AAGCATCTCC AACAAGGCAT CGAAAGCGAC 
CACTTCCGGC TGAAGAAGAA CATGCCGAAG ATCGGCGGGT TTCAGTCATT CAACACTGCG 
CGGCGAACCA TCGCGGGTTT CGAGGCGATG CTGTGGTTGA GGAAAGGCTT CGGCTATTCC 
GGCGGCTGGA CCGTCAACGA CCAGAACGAT CTGCTTGCGC GCCTCTTCGG ACTACAAAAG 
GTTAACAAAG TATAA
 
Protein sequence
MNAITEKLKR QSKDDFKGRH FEAWLIVQAV AWYLRYPLSY RDLEEMFRER SFEVDHSTIN 
RWVLAYAPMI EKRLRQFRRP HCGSVRVDET YVKIRGKWRY VYRAIGKHGN PVDFLLTAKR 
DLDAANTFPS AIKTSVDSGL LHPDPVHYAT KHLQQGIESD HFRLKKNMPK IGGFQSFNTA 
RRTIAGFEAM LWLRKGFGYS GGWTVNDQND LLARLFGLQK VNKV