Gene Avi_7134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7134 
Symbol 
ID7380177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp108406 
End bp109317 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content54% 
IMG OID643641255 
ProductIntegrase catalytic core 
Protein accessionYP_002539552 
Protein GI222102513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCATT ATTTTCCCTC GAATGGAAGG AAGCACTATG GGCCAGGCTC TATACGGTCG 
CGCCACAACG ATAGGTCAAG CGGATTAGAA AACAGTCCAG TGGACTGTTT TCCCGCGCAG
ACGGTCCGTC GAGCAATACA AAATAGTCAA GAGAGCCTGA GAGCGCTCTC AAAGCGGTAT
GGGATCAACC CGAAGACCGT TGCCAAGTGG AAGAAGCGCA CATCGGTTGC CGATTTGGCG
ACCGGGCCGA AGGAACCGCA TTCGACAGTC TTGATCCTCG AGGAGGAGGC CGTGATTGTC
GCCTTCCGCA GGCACACGCT TCTACCTTTG GATGATTGCC TTTATGCCCT TCAGCCAACA
ATCCCGCATC TGACGCGCTC GTCCTTACAT CGATGCCTAC AGCGCCATGA CATTTCACGA
CTGCCGGAAG TCGAGGGCGA CAAGGAGCCA AAAAAGAAGT TCAAGAGTTA CCCCATTGGC
TACTTTCACA TCGATATCGC TGAAGTCCAG ACCGCTGAGG GCAAGCTCTA TCTGTTTGTG
GCCATTGATA GAACGTCCAA GTTTGCCTTC GTCGAGCTTT ACGCCAAAGC CGGAAAGATG
AATGCAGCCC AATTCCTGCG CAATCTGGTC AAGGCTGTAC CCTATGCCAT CCATACGGTT
CTGACGGACA ACGGCATTCA GTTCACCAAT CGGGCCTGCG ATCTCTACGC CTTCCATCAC
ATCTTCGACC GGGTCTGTGA CGAGAACGGC ATTGAGCATC GTCTGACCAA GGTGAAGCCC
CCCTTGGACC AATGGGCAGG TCGAGCGACT GGAAAGCACG ATCAAGGAAG CGACCGTCAA
GCGTGTCCAC TACAACGACG CCTACAATTT CGGGCGAAGG CGCAAGACCC TAAAGAGCCT
CACGCCCTAT GA
 
Protein sequence
MVHYFPSNGR KHYGPGSIRS RHNDRSSGLE NSPVDCFPAQ TVRRAIQNSQ ESLRALSKRY 
GINPKTVAKW KKRTSVADLA TGPKEPHSTV LILEEEAVIV AFRRHTLLPL DDCLYALQPT
IPHLTRSSLH RCLQRHDISR LPEVEGDKEP KKKFKSYPIG YFHIDIAEVQ TAEGKLYLFV
AIDRTSKFAF VELYAKAGKM NAAQFLRNLV KAVPYAIHTV LTDNGIQFTN RACDLYAFHH
IFDRVCDENG IEHRLTKVKP PLDQWAGRAT GKHDQGSDRQ ACPLQRRLQF RAKAQDPKEP
HAL