Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7134 |
Symbol | |
ID | 7380177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 108406 |
End bp | 109317 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641255 |
Product | Integrase catalytic core |
Protein accession | YP_002539552 |
Protein GI | 222102513 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCATT ATTTTCCCTC GAATGGAAGG AAGCACTATG GGCCAGGCTC TATACGGTCG CGCCACAACG ATAGGTCAAG CGGATTAGAA AACAGTCCAG TGGACTGTTT TCCCGCGCAG ACGGTCCGTC GAGCAATACA AAATAGTCAA GAGAGCCTGA GAGCGCTCTC AAAGCGGTAT GGGATCAACC CGAAGACCGT TGCCAAGTGG AAGAAGCGCA CATCGGTTGC CGATTTGGCG ACCGGGCCGA AGGAACCGCA TTCGACAGTC TTGATCCTCG AGGAGGAGGC CGTGATTGTC GCCTTCCGCA GGCACACGCT TCTACCTTTG GATGATTGCC TTTATGCCCT TCAGCCAACA ATCCCGCATC TGACGCGCTC GTCCTTACAT CGATGCCTAC AGCGCCATGA CATTTCACGA CTGCCGGAAG TCGAGGGCGA CAAGGAGCCA AAAAAGAAGT TCAAGAGTTA CCCCATTGGC TACTTTCACA TCGATATCGC TGAAGTCCAG ACCGCTGAGG GCAAGCTCTA TCTGTTTGTG GCCATTGATA GAACGTCCAA GTTTGCCTTC GTCGAGCTTT ACGCCAAAGC CGGAAAGATG AATGCAGCCC AATTCCTGCG CAATCTGGTC AAGGCTGTAC CCTATGCCAT CCATACGGTT CTGACGGACA ACGGCATTCA GTTCACCAAT CGGGCCTGCG ATCTCTACGC CTTCCATCAC ATCTTCGACC GGGTCTGTGA CGAGAACGGC ATTGAGCATC GTCTGACCAA GGTGAAGCCC CCCTTGGACC AATGGGCAGG TCGAGCGACT GGAAAGCACG ATCAAGGAAG CGACCGTCAA GCGTGTCCAC TACAACGACG CCTACAATTT CGGGCGAAGG CGCAAGACCC TAAAGAGCCT CACGCCCTAT GA
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Protein sequence | MVHYFPSNGR KHYGPGSIRS RHNDRSSGLE NSPVDCFPAQ TVRRAIQNSQ ESLRALSKRY GINPKTVAKW KKRTSVADLA TGPKEPHSTV LILEEEAVIV AFRRHTLLPL DDCLYALQPT IPHLTRSSLH RCLQRHDISR LPEVEGDKEP KKKFKSYPIG YFHIDIAEVQ TAEGKLYLFV AIDRTSKFAF VELYAKAGKM NAAQFLRNLV KAVPYAIHTV LTDNGIQFTN RACDLYAFHH IFDRVCDENG IEHRLTKVKP PLDQWAGRAT GKHDQGSDRQ ACPLQRRLQF RAKAQDPKEP HAL
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