| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3317 |
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| Symbol | |
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| ID | 7315545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3460606 |
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| End bp | 3461946 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643618217 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002515371 |
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| Protein GI | 220936472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACT CGCCTGAAGA CACCATCGCC GCCATCGCCA CCCCGCCGGG CTTCGGCGGG
GTGGGGGTGG TGCGGATCTC CGGGCCAAAT ACCGCCGCCC TTGCCAGGGC AATCCTGGGC
CGACTCCCAG CCCCCCGTCA CGCCACCTAC GCACCCTTCC TGGGCGAACA GGGTGAGACC
CTGGACGACG GCATCGCGCT GTTCTTCCCC GGCCCCCGTT CCTACACCGG AGAGGACACC
CTGGAACTCC AGGGCCACGG CGGCCCGGTG GTGCTCGACC TGCTGCTCAG CCGCTGCCTG
GCCCTGGGCT GTCGCGCGGC GCGACCCGGG GAGTTCACCG AACGGGCGTT TCTGAACGGT
CGCCTGGACC TGGCCCAGGC AGAGGCGGTC GCCGACCTCA TCGAGGCCGG CTCCGCCCAG
GCGGCGCGCT CGGCAAGACG CGCCCTGGAA GGGGCGCTCT CCCACGAGGT CAATGCCCTG
CTGGATGCCC TGACCGGCCT GCGGGTCTCG GTGGAGGCGG CCCTGGATTT TCCCGACGAG
GACGTGGACA TCCTGCGCGA GGCGCAGGTG CAGGCGCGCC TTGCAGATCT GTCCGGGAGG
ATCGATCGGC TCATCCGGGG CGCCGCCCAG GGCGCGCTGC TGCGCGAAGG GCTGCGCCTG
GTGATCGCCG GGCGGCCCAA CGCCGGCAAG TCCAGCCTGC TCAACCGCCT GGTGCGCCGC
GAGGCAGCCA TCGTCACCCA CATCCCCGGC ACCACCCGGG ACGTGCTGCG CGAGACCGTG
AGCCTGGATG GCCTGCCCCT GCACCTGGTG GATACCGCCG GCCTGCGGGA GTCCGACGAC
CCGGTGGAAC AGGAAGGCAT CCGCCGCGCC TGGGCCGAGA TCGAGGCCGC CGACGCGGTG
CTGCTGGTGG TGGACGATGC CCTGGGGGAG GGCGAGGAGG AGGCGGCCAT CCGCGCGCGC
CTGCCCGGCC ATCTGCCGGT GATCTGCGTG CACAACAAGA TCGATCTCAC CGGCCGGGTG
CCGGGCAAGC AGGGCGGGGT CCTCTACCTC AGTGCCCAGG ACGGGCAGGG GGTGGACAGC
CTGCGCGAGC ATCTCAAGGC ACAGGCCGGA TTCTCCGGCG GCGAAGGCCT GTTCCTGGCC
CGGCGCCGGC ACCTGGATGC CCTGACCCGT ACCGCCGGTC ACGTGGCCAC CGCCCGGGAT
GCCCTGGCCG TCGGTGCCGG ACCGGAGCTG GTGGCCGAGG ACCTGCGCCT GGCCCAGGAG
ACCCTGGGCG AGATCACCGG ACGCTTCTCC TCCGACGACC TGCTGGGCCG GATCTTCTCC
ACCTTCTGCA TCGGCAAATA G
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| Protein sequence | MADSPEDTIA AIATPPGFGG VGVVRISGPN TAALARAILG RLPAPRHATY APFLGEQGET
LDDGIALFFP GPRSYTGEDT LELQGHGGPV VLDLLLSRCL ALGCRAARPG EFTERAFLNG
RLDLAQAEAV ADLIEAGSAQ AARSARRALE GALSHEVNAL LDALTGLRVS VEAALDFPDE
DVDILREAQV QARLADLSGR IDRLIRGAAQ GALLREGLRL VIAGRPNAGK SSLLNRLVRR
EAAIVTHIPG TTRDVLRETV SLDGLPLHLV DTAGLRESDD PVEQEGIRRA WAEIEAADAV
LLVVDDALGE GEEEAAIRAR LPGHLPVICV HNKIDLTGRV PGKQGGVLYL SAQDGQGVDS
LREHLKAQAG FSGGEGLFLA RRRHLDALTR TAGHVATARD ALAVGAGPEL VAEDLRLAQE
TLGEITGRFS SDDLLGRIFS TFCIGK
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