| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3271 |
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| Symbol | |
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| ID | 7315499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3422406 |
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| End bp | 3424130 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643618172 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002515326 |
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| Protein GI | 220936427 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC CCGCAACGTC CGAGGGTCGA CGCAAGATCC GGCTGGGTGA CCTGCTGGTG
GAGAACGGCA TCATCTCCGG CAAGCAGCTG GAGGAGGCCC TGTCCGTCCA GAAGCGCACC
GGCAACAAGC TGGGACGCAC GCTCATCGAG ATGGGCGTAA TCTCCGAGGA CGCGCTGCTC
AACTTCCTGT CCCGCCAGCT CAACATTCCA CTGGTGGACT TGCGCCACTA TCGCTTCAAC
AGCGAGCTGC TGCATCGCCT GCCGGAGACC GCCGCACGGC GTTTCCGCTG CATCATGCTG
GCGGAGCAGG ATGACGGCTA CCTGGTGGGC ATGGCCGATC CCACGGACAT CTTCGCCCAG
GACGAGATCA CGCGGCTGGT CGGCAAGCCC GTGCTGGCGG CGGTGGTGCG CGAGGCGGAC
CTGTTGCGCA CCTTCGACAC CGTCTACCGG CGCACGGAGG AGATCAGCGA TCTGGCCGAG
GAACTGGGTC AGGAGCTGGC GGAGAGTGAC TTCGACGTGG CCCAGCTCGC TGCCTCCGAC
GAGGTGACCG ACGCCCCGGT GGTCAAGTTG CTGCGCAGTC TGTTCGAGGA CGCCGTCCAG
GTGAGCGCCT CGGACATCCA TATCGAGCCC GACGAGAACG CCCTTCGCAT TCGTCAGCGT
ATCGACGGCG TGCTGCAGGA ACAGGTGATG AAGGAGAAGC GCATCGCCAA CGCGGTGGTG
CTGCGCCTCA AGCTCATGGC GGGCCTGAAC ATCTCCGAGA AGCGACTGCC CCAGGACGGG
CGCTTCAACA TCAAGGTCAA GAACAAGAGC ATCGACGTGC GACTCTCCAC CATGCCCATC
CAGCATGGCG AGTCGGTGGT GATGCGACTG CTGGACCAGT CCACGGGCAT CCTGGACCTG
CTGCACCTGG GCATGCCGCC GGACATCCTG GCGCACCTGC GCCGCATCCT GCGCCACCCC
AGCGGCATGG TGCTGGTCAC CGGCCCCACC GGCAGCGGCA AGACCACGAC CCTGTACGCC
GCGCTGCAGG AACTCAACGT GCCTGACCGC AAGATCATCA CCGTGGAAGA CCCGGTGGAG
TACCGGCTGC CGCGCATCAA CCAGGTACAG GTGAACCCGC GCATCGGGCT GGAATTCGCC
ACGGTGCTGC GCGCCGCCCT GCGACAGGAC CCGGACGTGA TCCTGGTGGG CGAGATGCGT
GACCAGGAGA CCGCCGAGAT CGGCCTGCGC GCCGCCATGA CCGGCCACCT GGTGCTCTCC
ACGCTGCACA CCAATGACGC GATCAGCACC GCCGACCGAC TGCTCGACAT GGGCGCCCAG
GGTTTCCTGC TGGCCTCCTC GCTGCGCGCC ATCATCGCAC AGCGTCTGGT GCGGCGGGTG
TGCGAGTTCT GCGCCGAGGC CCACGTACCC GACGCGCACC AGGCGAGCTG GATGCGCACG
GTGCTGGGCG ATGGCGCCGA CTTCTCGCGC CTGCGCCACG GGCGCGGCTG CACCCATTGC
AACAACACCG GCTATCGGGG CCGCATCGGC GTGCATGAAT ACCTGGAACC GGACGAGGCC
ATGCTCACCG CGTTGCGTCG TTCCCGCATG GACGAGTTCG CCAGGGCCGC CCGTGCCAAT
CCCCTGTATC GGCCGCTCAT GCGCGTGGCT CTGGACTACG CCCTGGAAGG CCGCACCAGC
GTGGACGAGG CCCAGCGGCT CGCCGCCGAG GTGGAGGTGC ACTGA
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| Protein sequence | MNMPATSEGR RKIRLGDLLV ENGIISGKQL EEALSVQKRT GNKLGRTLIE MGVISEDALL
NFLSRQLNIP LVDLRHYRFN SELLHRLPET AARRFRCIML AEQDDGYLVG MADPTDIFAQ
DEITRLVGKP VLAAVVREAD LLRTFDTVYR RTEEISDLAE ELGQELAESD FDVAQLAASD
EVTDAPVVKL LRSLFEDAVQ VSASDIHIEP DENALRIRQR IDGVLQEQVM KEKRIANAVV
LRLKLMAGLN ISEKRLPQDG RFNIKVKNKS IDVRLSTMPI QHGESVVMRL LDQSTGILDL
LHLGMPPDIL AHLRRILRHP SGMVLVTGPT GSGKTTTLYA ALQELNVPDR KIITVEDPVE
YRLPRINQVQ VNPRIGLEFA TVLRAALRQD PDVILVGEMR DQETAEIGLR AAMTGHLVLS
TLHTNDAIST ADRLLDMGAQ GFLLASSLRA IIAQRLVRRV CEFCAEAHVP DAHQASWMRT
VLGDGADFSR LRHGRGCTHC NNTGYRGRIG VHEYLEPDEA MLTALRRSRM DEFARAARAN
PLYRPLMRVA LDYALEGRTS VDEAQRLAAE VEVH
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