Gene Tgr7_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3217 
SymbollspA 
ID7315590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp3367572 
End bp3368063 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID643618117 
Productlipoprotein signal peptidase 
Protein accessionYP_002515273 
Protein GI220936374 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAT GGTTATGGCT TTCCGCCGCG GTGATCGTCC TGGACCAGAT CACGAAATAC 
GTGGCCGAAC GCTCGCTGGT GCTCTATGCC CCGGTGGAGA TCACCCCATT CTTCAACTTC 
ACCCTGGTCT ACAACCCCGG CGCCGCCTTC AGCTTCCTGG GTGACGCCTC CGGCTGGCAG 
CGCTGGTTCT TCGTTGCCGT GGCCTTCGGT GCCTCGATAT TCATCCTCTG GTGGCTCAGG 
AATCTTCGCG CCGACGAGCG CTGGACCGCC GCCAGCCTCG CCCTGATCCT GGGCGGCGCC 
ATCGGCAATG TCATCGACCG CCTCTGGCAT GGCCATGTGA TTGATTTCCT GGATTTTCAC 
TACGCTGGCT ACCACTGGCC CGCCTTCAAC GTGGCCGACG CCGCCATCAC CGTTGGCGCC 
GTGGTACTGG TGGGGTACAG TCTGATGTTC GCGCGTGAGT CCGACGCCCC CGGCGCAGGA 
GGTCGATCAT GA
 
Protein sequence
MLKWLWLSAA VIVLDQITKY VAERSLVLYA PVEITPFFNF TLVYNPGAAF SFLGDASGWQ 
RWFFVAVAFG ASIFILWWLR NLRADERWTA ASLALILGGA IGNVIDRLWH GHVIDFLDFH 
YAGYHWPAFN VADAAITVGA VVLVGYSLMF ARESDAPGAG GRS