Gene Tgr7_3148 details

Gene Information

• Locus tag: Tgr7_3148
• ID: 7317378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 3295688
• End bp: 3297505
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643618047
• Product: GTP-binding protein TypA
• Protein accession: YP_002515204
• Protein GI: 220936305
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.284484
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACA AGCTTCGCAA TATCGCCATC ATCGCCCACG TTGACCACGG CAAGACCACC 
CTGGTGGACA AGCTGCTGCA GCAGTCCGGT ACCTTCGGTG AACGGGCCCA CATCACCGAA 
CGCATGATGG ACTCCAACGC GCTGGAGCAG GAACGCGGTA TCACCATCCT GGCGAAGAAC 
ACGGCCCTGA CCTGGAACGG CTACCGCATC AACATCGTGG ATACCCCCGG GCACGCCGAC 
TTCGGCGGCG AGGTGGAGCG GGTGCTGTCC ATGGTGGACT CGGTGCTGCT GCTGGTGGAC 
GCGGTGGACG GGCCCATGCC CCAGACCCGC TTCGTGACCT CCAAGGCCTT CGCCATGGGC 
TTCAAGCCCA TCGTGGTGGT GAACAAGATC GACCGCCCCG GCGCCCGGCC GGACTGGGTG 
GTGGACCAGA TCTTCGACCT GTTCGACCGC CTGGGCGCCA CCGAGGAGCA GCTGGATTTC 
CCGGTAGTCT ACTGCTCGGC CCTGAAGGGC TTTGCCGGGC TGACCAAGGA CGTGACCGAG 
GGCGACATGA CGCCCCTGTT CCAGACCATC ATCGACAAGG TGAGCCCGCC GGCCGTGGAC 
GCCGAGGGCC CGTTCCAGAT GCAGGTCTCC TCGCTGGACT ACAACAGCTT CCAGGGCCTC 
ATCGGCATCG GCCGCATCAC CCGCGGCAAG GTCAAGACCA ACAGCGCCGT GAAGGCCATC 
GACCGGGAAG GCAATGTGCG CTCCGGCCGC ATCCTGCAGA TCCTGGGCTT CAAGGGCCTG 
GAGCGCGTCG AGGTGCCCGA GGCCCGCGCC GGCGACATCA TCGCCTTCAC CGGCATGGAT 
GAACTGTACA TCTCCGACAC CCTGTGTGAC CCGGCTGCGG TCGAGGCGCT CAAGGCGCTG 
ACCGTGGACG AGCCCACGGT GAGCATGACC TTCCAGGTCA ACACCTCGCC CTTCGCCGGC 
AAGGAAGGCA AGTTCGTCAC CTCCCGCAAC ATCCGCGACC GGCTGTTCGA GGAGCTCAAG 
CACAACGTGG CCCTGCGCGT GGAGGAGACC GAAGATCCGG ACAAGTTCCG CGTCTCCGGT 
CGCGGCGAGC TGCACCTGTC CATCCTGATC GAGAACATGC GCCGCGAGGG CTTCGAGCTG 
GGCGTGTCGC GCCCCGAGGT GATCGTGCGC GAGCGTGACG GGGTCCGGGA AGAGCCCTAC 
GAGATGGTGA CCGTGGACGT GGAGGAGCAG CACCAGGGCG CCATCATGGA GAAGCTGGGC 
GGGCGCCGCG GTGAACTGCT GGACATGATC CCCGACGGCA AGGGCCGGGT GCGCCTGGAC 
TACAAGGTGC CCTCCCGCGG CCTGATCGGC TTCCAGACCG AGTTCCTCAC CGCCACCTCC 
GGCACCGGCA TCCTGCACCA CGTGTTCGAC AGCTACGGCC CCTACCGACC CGGCTCCGTG 
GGCGCTCGCA ACAACGGCGT GCTGATCGCC AACGGCGCCG GCAAGGCCCT GGGCTACGCC 
CTGTTCAACC TGCAGGAGCG CGGCCGCCTG TTCATCGGCC ATGGCGATGA GGTCTACGAG 
GGCATGGTGA TCGGCCTGCA CAGCCGCGAC AACGACCTGG TGGTCAACCC GCTCAAGGCC 
AAGCAGCTGA CCAACATCCG CGCCGCCGGC TCCGACGAGA ACATCATCCT CACCCCGCCC 
ATCCGCATGA CCCTGGAGCA GGCCCTGGAG TTCATCGAGG ACGACGAACT GGTGGAAGTC 
ACGCCCAAGT CCATCCGGGT GCGCAAGAAG CTGCTGCTGG AACACGAGCG CAAGCGGGCC 
TCGCGCGCGG CGAGCTGA 

 

Protein sequence

MTDKLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERAHITE RMMDSNALEQ ERGITILAKN 
TALTWNGYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTSKAFAMG 
FKPIVVVNKI DRPGARPDWV VDQIFDLFDR LGATEEQLDF PVVYCSALKG FAGLTKDVTE 
GDMTPLFQTI IDKVSPPAVD AEGPFQMQVS SLDYNSFQGL IGIGRITRGK VKTNSAVKAI 
DREGNVRSGR ILQILGFKGL ERVEVPEARA GDIIAFTGMD ELYISDTLCD PAAVEALKAL 
TVDEPTVSMT FQVNTSPFAG KEGKFVTSRN IRDRLFEELK HNVALRVEET EDPDKFRVSG 
RGELHLSILI ENMRREGFEL GVSRPEVIVR ERDGVREEPY EMVTVDVEEQ HQGAIMEKLG 
GRRGELLDMI PDGKGRVRLD YKVPSRGLIG FQTEFLTATS GTGILHHVFD SYGPYRPGSV 
GARNNGVLIA NGAGKALGYA LFNLQERGRL FIGHGDEVYE GMVIGLHSRD NDLVVNPLKA 
KQLTNIRAAG SDENIILTPP IRMTLEQALE FIEDDELVEV TPKSIRVRKK LLLEHERKRA 
SRAAS