| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3123 |
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| Symbol | |
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| ID | 7317353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3273375 |
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| End bp | 3274226 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643618022 |
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| Product | spermidine synthase |
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| Protein accession | YP_002515179 |
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| Protein GI | 220936280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.873579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGG ACAACACCTG GTTCACCGAG ATCCATCAGG ACACGGCCTT CTCGCTGCGC
ATGAAGGAAA AGCTGCACGA GGAACAGACG CCGTTCCAGA AGATCGAGAT CTACGAGACC
GAGGGCTTCG GCACCCTGAT GGTGATCGAC GGCTGCGTGA TGCTCACCGA CCGGGACAAC
TTCATCTACC ACGAGATGAT GTCCCACCCG GTGTTGTATT CCCATTCTGA TCCCAAGAAC
GTGCTGATCA TCGGCGGCGG CGACTGCGGC ACCCTGCGCG AGGTGCTCAA GCACCCCGAG
GTGAAGTCCG CCACCCAGGT GGACATCGAC GAGCGGGTAA CCCGCCTCGC AGAAAAATAT
TTCCCGGAGC TGTGCGATTC CAACGACGAT CCGCGGGCGA AGCTCCTGTT CGACGATGGC
ATCAAGTACG TGCAGGACGC AGCACCCGGC TCGCTTGACG TGATCATCAT CGACAGCACC
GATCCGGTGG GCCCGGCGGA AGGCCTGTTC TCCACCGCCT TCTACAGGGA CTGCATCAAG
GCCCTGGGCC CCGGCGGCCT GCTGGTACAG CAGAGCGAGT CGCCCCTGCT GCACACCGAT
TCCATCATCA AGCCCATGCA CGACAGCCTG CGTGCCGCCG GTTTCCTGGA CACCCTCGCC
CTGCACTTCC CCCAGTGCAG CTACCCCTCC GGCTGGTGGA CCGCCACCAT GGCCTGCAAG
GACATGCCCG TGACCTTCCT GCGCGAAGCG CAGGCGGAAG ACAAGCCCTT CGAGACCCAC
TACTACAACG CCGCCATCCA GCGCGCCGCC ATTGCCTGCC CGGAGTTCTT CCGCAAGAAG
CTGTACGGGT AA
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| Protein sequence | MSLDNTWFTE IHQDTAFSLR MKEKLHEEQT PFQKIEIYET EGFGTLMVID GCVMLTDRDN
FIYHEMMSHP VLYSHSDPKN VLIIGGGDCG TLREVLKHPE VKSATQVDID ERVTRLAEKY
FPELCDSNDD PRAKLLFDDG IKYVQDAAPG SLDVIIIDST DPVGPAEGLF STAFYRDCIK
ALGPGGLLVQ QSESPLLHTD SIIKPMHDSL RAAGFLDTLA LHFPQCSYPS GWWTATMACK
DMPVTFLREA QAEDKPFETH YYNAAIQRAA IACPEFFRKK LYG
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