Gene Tgr7_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_3122 
Symbol 
ID7317352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3272387 
End bp3273193 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID643618021 
Producthypothetical protein 
Protein accessionYP_002515178 
Protein GI220936279 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.859294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTGA TCGCCCTCTC GCCCTGGGAC CTGTCCCTCG CCGCTGCCCT GGTGGTGGCG 
CTGGCCGCGC TGACCGCGCG CATCGGCATG GGCCTGTCCC GCAGCCTGCT GATCTCCGGC
GCACGCACCG TCATTCAGCT GCTGCTCATC GGCCTGGTGC TCAAGACCCT GTTCGAGAAC
GCCCAGCTCT ACTGGGTGGC GGGCCTCGCG CTGATCATGC TTTCCGTGGC CGGCTATGAG
GTGATGGCCC GTCAGGGCCG GCGCTTCTCC GGATGGTGGG GCTACGGCAT CGGCACCTCG
GCCATGTTCG TCTCCGCCTT CGCGGTCACG GTACTGGCGC TCACCACCAT GATCGGCCCG
AGCCCCTGGT GGGAACCCCA GTACGCCATC CCGCTACTGG GCATGCTGCT GGGCAACACC
ATGACCGGGA TCGCCTTAGG CTTGGATCGC CTCACCCAGA CCGCCTGGCA GCAGCGCCGG
GTGATCGAGG CGCGTCTCAT GATGGGACAT GGCTGGAGTG AATCCATCGG CCAGATCCGC
CGCGACGCGG CGCGCAGCGG CCTGATGCCC ATCATCAACG CCATGGCCGC GGCGGGCATC
GTCAGCCTGC CCGGCATGAT GACCGGCCAG ATCCTGGCCG GCACCCCGCC CATGGAGGCG
GTGAAATACC AGATCCTGAT CATGTTCCTG ATCACCGCCG GCACCGGCTT CGGCACCCTG
GGCGCGGTCT GGCTCGGCTC GAAGCGGCTG TTCGACGACC GTCAGCGGCT GCGGCTGGAT
CGCCTCAAGC CGGGGCGGGG GAAGTAA
 
Protein sequence
MNVIALSPWD LSLAAALVVA LAALTARIGM GLSRSLLISG ARTVIQLLLI GLVLKTLFEN 
AQLYWVAGLA LIMLSVAGYE VMARQGRRFS GWWGYGIGTS AMFVSAFAVT VLALTTMIGP
SPWWEPQYAI PLLGMLLGNT MTGIALGLDR LTQTAWQQRR VIEARLMMGH GWSESIGQIR
RDAARSGLMP IINAMAAAGI VSLPGMMTGQ ILAGTPPMEA VKYQILIMFL ITAGTGFGTL
GAVWLGSKRL FDDRQRLRLD RLKPGRGK