Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3091 |
Symbol | |
ID | 7316021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3239978 |
End bp | 3240799 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643617990 |
Product | cytochrome c class I |
Protein accession | YP_002515147 |
Protein GI | 220936248 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 [COG3245] Cytochrome c5 |
TIGRFAM ID | [TIGR01195] sodium pump decarboxylases, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.994793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAACC CACAACAGAA GACTGACTTC ACGACCAAAT TCGTTCTGGC CATCAGCGTC GTGGTACTGC TGGTGACCGT GATCTTCCTG GTGACCCGCC TGATCAATGT GATCGATCAG GCACGTGCCC CGGCCGAACC GAGCACCTCC GCCCAGGCCA TGGTGGAGGA GCGCATCCGG CCCATCGGCC GCGTGGTCTC CGCCGATGTG GACGCCCAGG CCGTTGCCGC GCCCCGCACC GCCGCCGACA TCTACCGCGG CGTCTGCGCT GCCTGCCACG ACACCGGCGC CGCCGGTGCC CCCCGCAAGG GCGACGAGGC CGAATGGCGC ACGCGCATGG GCCAGGGCTT CGACACCGTC CTGAGCCATG CCATCAACGG CTTCAACGCC ATGCCCGCCC GGGGCGGCGA TCCCAGCCTG AGCGATGACG ACATGCGCCA GGTGGTGGCC TACCTGCTGA CTGAATCCGG CATCCGCGTG AACGGCGCCG CTGCCAGCGC ACCCGCGGCT GCGCCTGCTG CTGCTCCGGC TGCGGCTGCT CCTGCTCCTG CGGCCGCCCC TACCGCCACC GCCGCAGCCG GCGACGCCAC TGCCGGTCAG GCCAAGTTCG CCAGCTGCGC CGCCTGTCAC GGCGCCCAGG GCCAGGGCAT GGGCATCTTC CCCAAGCTGG CCGGCACCGC CCCCGAGCGC ATCGCCGAAC TGCTGAAGAA GTACCGCGCC GGCGAGCAGG TCGGTCCCCA GACCGCCCTG ATGGCCCCCA ACGCCACCGG CCTGTCCGAC CAGGACATCG CCGACCTGGC CGCCTTTGTC GGCACCCTGT AA
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Protein sequence | MANPQQKTDF TTKFVLAISV VVLLVTVIFL VTRLINVIDQ ARAPAEPSTS AQAMVEERIR PIGRVVSADV DAQAVAAPRT AADIYRGVCA ACHDTGAAGA PRKGDEAEWR TRMGQGFDTV LSHAINGFNA MPARGGDPSL SDDDMRQVVA YLLTESGIRV NGAAASAPAA APAAAPAAAA PAPAAAPTAT AAAGDATAGQ AKFASCAACH GAQGQGMGIF PKLAGTAPER IAELLKKYRA GEQVGPQTAL MAPNATGLSD QDIADLAAFV GTL
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