Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3086 |
Symbol | |
ID | 7316016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3232335 |
End bp | 3232787 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643617985 |
Product | putative transcriptional regulator, CopG family |
Protein accession | YP_002515142 |
Protein GI | 220936243 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.817448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA ACGGAGGCGT CAGCCGCATC AGCATCTCCC TGCCCGAGCC CCTGCTCGGG CAGCTGGACG ACATGGTGGA GGCGCGCGGT TACGAGAGCC GTTCCGCGGC GCTGGCGGAG ATGATCAGCC ACCAGTTGGT GGCCCACAAA CGGGAACTGG GCAACGAGGT GATGGCCGGC ACCATCACCC TGCTCTACGA CCACAGCACG CCGCGCCTGC AGAAGGTCCT CGCGGACCTG CAGCACGAGC ACGTGGAGGA GGTGATCAGC TCCCTGCACA TCCACCTGAT GCACAACCGC GCCATGGAGG TGATCCTGGT GCAGGGCCCG GCGACCCAGC TGCAGGTCAT CGCCGACCGC ATGATCACCA ACCGGGGTGT GATCTCCGGC AAGCTGGAAC TGACCACCAC CCTCATCCCC CAGGTGCACC AGCCGCCCGC CCGTGGCAAC TGA
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Protein sequence | MKANGGVSRI SISLPEPLLG QLDDMVEARG YESRSAALAE MISHQLVAHK RELGNEVMAG TITLLYDHST PRLQKVLADL QHEHVEEVIS SLHIHLMHNR AMEVILVQGP ATQLQVIADR MITNRGVISG KLELTTTLIP QVHQPPARGN
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