| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3042 |
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| Symbol | |
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| ID | 7315971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3190510 |
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| End bp | 3191676 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643617940 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002515098 |
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| Protein GI | 220936199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.646056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACG CCACCCTGGT GGAGGCCTAC CGGGACACCC AGCAGCGCCT GCTGGGTCTC
ATGGAATGTC TCTCCGCGCT GCAGGATCTC TCCAGCCTCG ATCTCAATAC CCCTGACCTG
GGTGAACTGC TCAAGGCCGC CCTGAGGGCC TTGCTGGAGA ACCAGGGCAT GGAACGTTGT
TCCGTGTTTC TGAATGAGGG GGGCGTGCTG GTCAACGCCG CCGGCATGGA TTGGTCCGAC
CTCATGGGTG CGGACGTCGG TTCCCGGGAG TCTTCGATTG CCTGCCTGCG GGTGGGCGAG
GGCATCATGG GACTGGCTGT TGCCAGCGGT GAGATCCAGT GCTGCAGCGA CTGCGGTGGT
GATGACCGTT TCGCCGAGTT GGGCAACGAG GTCCCCGTGG GCAGCCTGGT GTGCCTGCCC
ATCCGCCAGG GCGACGAGGT GCTGGGCGTG CTCAACGTCT CCCACCCGGA ACCCCATTTC
TTCAACCAGG ACCGGGAACG CCTGTTGCGC CTGTTCAGCG TCTACCTGGG TCAGTCCGTG
ACCTACTGGC GCCACACCCA CCAGATGGAG GCGGTCATCC GGGAGCGCAC CGCGGAACTG
CGCCAGGCAC TCGATCAGGC CCAGGAACTG CGTGAGCGCT ACGAGGCCCT GGCGGTGGTG
GATGACCTCA CCGGCCTGAA CAACCGGCGC TTCTTCTTCC CCGAGGCCCA GGCGGCCCTG
TCCCGTACCC GCCGCCATGG CCAGCCCTTC GCGGTGCTGG CCCTGGACCT GGATCACTTC
AAGCGGGTCA ACGACGACCA CGGCCACGCC TGGGGAGACC GGGTGCTGCA GGACGTGGGC
GCCGCGCTGA AATCCATGCT GCGCGAGGGC GACATCCTGG CGCGCTTCGG CGGCGAGGAA
TTCATGTTCG CCCTGCCCGG CACCGACTTG GAAGGCGCCA TGAGCCTGGC GCAACGCATC
CGCGCGCGCC TGGCGAAGCT GTCCTGGAAC GTGGGCGACC GCTGCCTGCT GGTCACCGCC
AGCATGGGTG TTTCAGGGCT GGGTGAAGAT GAGGCGGCGG AAGGCAGCAG CCACGAGATC
CTGGACCGCC TGGTGGCCCA GGCCGACGAG GCCCTTTACG GCAGCAAGCA CGCCGGACGG
GACCGGGTGA CGGTGGGCAC GCAGTAA
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| Protein sequence | MDNATLVEAY RDTQQRLLGL MECLSALQDL SSLDLNTPDL GELLKAALRA LLENQGMERC
SVFLNEGGVL VNAAGMDWSD LMGADVGSRE SSIACLRVGE GIMGLAVASG EIQCCSDCGG
DDRFAELGNE VPVGSLVCLP IRQGDEVLGV LNVSHPEPHF FNQDRERLLR LFSVYLGQSV
TYWRHTHQME AVIRERTAEL RQALDQAQEL RERYEALAVV DDLTGLNNRR FFFPEAQAAL
SRTRRHGQPF AVLALDLDHF KRVNDDHGHA WGDRVLQDVG AALKSMLREG DILARFGGEE
FMFALPGTDL EGAMSLAQRI RARLAKLSWN VGDRCLLVTA SMGVSGLGED EAAEGSSHEI
LDRLVAQADE ALYGSKHAGR DRVTVGTQ
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