| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3030 |
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| Symbol | |
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| ID | 7315958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3171548 |
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| End bp | 3172633 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617928 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002515087 |
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| Protein GI | 220936188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.213133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCC TCACCGTAGA ACTCGGCGAC CGCAGCTACC CCATCCACAT CGGCCGTGGC
CTGCTGGACG ATCCGACCCG CTTCGCGCCG CGCATCCGTG GCAAGCGGGT GATGATCGTC
ACTAATGAGA CCGTCGCCCC CCTCTACCTG GACCGCCTCA AGCGCACTTT GGGTGACTTC
CGAGTGGAGG CGGTCATCCT GCCCGACGGG GAGGAATACA AGACCATGGA GACCCTCAAT
CAGGTCTATA CCGCCCTGCT CGAGGCTCGC TTCGACCGCA AGGCGACCCT GGTGGCCCTG
GGCGGCGGCG TGATCGGCGA CATCACCGGC TTTGCCGCGG CCAGCTATCA GCGGGGTGTG
GACTTCATCC AGGTGCCCAC CACCCTGCTT TCCCAGGTGG ACTCCTCCGT GGGTGGCAAG
ACCGGCGTCA ACCATCCGCT GGGCAAGAAC ATGATCGGCG CCTTCCACCA GCCCCGCTGC
GTGGTGATCG ACACCGACAC CCTGGACACC CTGCCGGACC GGGAACTGCG TGCCGGCATT
GCCGAGGTCA TCAAGTACGG GCTGATCTGC GACCGGCCGT TCTTCGACTG GCTGGAAGCA
AACATGGACC GCCTGCTGGC CCGCGACCCC GAGGCCCTGG CCTATGCCAT TCACCGCTCC
TGCCATGACA AGGCCCAGGT GGTGGCCGAG GACGAGCGGG AAGGCGGACG CCGCGCCATC
CTCAACCTGG GCCATACCTT CGGCCACGCC ATCGAGACCG GCATGGGCTA TGGTGTGTGG
CTGCATGGCG AGGGCGTGGC CACGGGCATG GTCATGGCCG CGCGCATGTC CCGGCGCCTG
GGCTGGCTGG ATGCGGAGGA TCTGCATCGC ACCGAGGCGC TGATCGCCAG GGCAGGCTTG
CCGGTCGAGC CGCCTCCCGA GATCACCGCG GAGCGTTTCG CGGAACTCAT GTCCGTGGAC
AAGAAGGTCC TGGACGGCCA GCTACGCCTG GTACTGTTGC GCGGCATCGG CGAGGCGGTG
GTTACCGCCG ATTTCGATCC AGCGGCCCTG GACGCCACGC TGAATCAGGT AGGAAGTGGG
AATTGA
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| Protein sequence | MQTLTVELGD RSYPIHIGRG LLDDPTRFAP RIRGKRVMIV TNETVAPLYL DRLKRTLGDF
RVEAVILPDG EEYKTMETLN QVYTALLEAR FDRKATLVAL GGGVIGDITG FAAASYQRGV
DFIQVPTTLL SQVDSSVGGK TGVNHPLGKN MIGAFHQPRC VVIDTDTLDT LPDRELRAGI
AEVIKYGLIC DRPFFDWLEA NMDRLLARDP EALAYAIHRS CHDKAQVVAE DEREGGRRAI
LNLGHTFGHA IETGMGYGVW LHGEGVATGM VMAARMSRRL GWLDAEDLHR TEALIARAGL
PVEPPPEITA ERFAELMSVD KKVLDGQLRL VLLRGIGEAV VTADFDPAAL DATLNQVGSG
N
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