| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3020 |
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| Symbol | |
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| ID | 7315948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 3160087 |
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| End bp | 3161142 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643617918 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002515077 |
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| Protein GI | 220936178 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.404032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAC TGAAAAACGA TCGCCTGCTG CGTGCCCTGT TGCGCGAACC CGTGGACACC
ACGCCCGTGT GGATCATGCG TCAGGCGGGC CGTTATCTGC CCGAGTACCG GGCCACCCGG
GCCCGGGCGG GCAGCTTCAT GGATCTGTGC CAGAGCCCGG AGATGGCCTG CGAGGTCACG
CTTCAGCCCC TGGAGCGCTT CCCCCTGGAT GCGGCCATCC TGTTCTCCGA CATCCTCACC
ATCCCCGACG CCATGGGCCT GGGCCTGTAT TTCTCCGAAG GGGAAGGCCC GCGCTTCGAG
CGCCCGGTAC AGGACGCCGC CGCCATTCGC GCCCTGGGCG TGCCCGATCC CGAGACTGAA
CTGCGCTACG TCACCGACGC GGTGCGCTTG ATCCGCCGCG AACTGGACGG ACGGGTGCCC
CTGATCGGCT TCTCCGGCAG CCCCTGGACC CTGGCCACCT ACATGGTGGA AGGCGGTTCT
TCCAAGGAAT TCGCCCGCAT CAAGGGCATG CTCTACGACG ATCCGTCCAC CCTGCACCAC
CTGCTGGGGG TGCTGGCCGA GGCGGTCACC GTGTACCTGA ACGCACAGAT CGCCGCCGGC
GCCCAGGCGG TGATGGTGTT CGACACCTGG GGCGGCAGCC TGACCCCCGA GGGCTACCGG
GAGTTCTCAC TCGCCTACAT GCAGCGCATC GTGGCGGGAC TGACCCGGGA GCACGAGGGT
CGGCGCGTGC CCGTGACCCT GTTCACCAAG GGCGGCGGCG CCTGGCTGGA GGTCATGGCG
GAAACCGGCT GCGACGCCCT GGGACTGGAC TGGACGGTGA ACATCGGCGA GGCGCGCCGG
CGCGTCGGCG ACCGGGTGGC GCTGCAGGGC AACCTGGATC CGGCGGTACT CTACGCCTCC
GCCGAGCGCG TGCGCGCAGC CGCCCGCAAG GTGGTCGAGG ACTTCGGCCC CGGCAGCGGC
CATGTCTTCA ATCTGGGCCA CGGCATCCAC CCGGGCATCG ACCCGGAGAA GGTCGCGGCC
CTGGTGGATG AGGTGCACAA GGCCGGTATG AAGTAG
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| Protein sequence | MNELKNDRLL RALLREPVDT TPVWIMRQAG RYLPEYRATR ARAGSFMDLC QSPEMACEVT
LQPLERFPLD AAILFSDILT IPDAMGLGLY FSEGEGPRFE RPVQDAAAIR ALGVPDPETE
LRYVTDAVRL IRRELDGRVP LIGFSGSPWT LATYMVEGGS SKEFARIKGM LYDDPSTLHH
LLGVLAEAVT VYLNAQIAAG AQAVMVFDTW GGSLTPEGYR EFSLAYMQRI VAGLTREHEG
RRVPVTLFTK GGGAWLEVMA ETGCDALGLD WTVNIGEARR RVGDRVALQG NLDPAVLYAS
AERVRAAARK VVEDFGPGSG HVFNLGHGIH PGIDPEKVAA LVDEVHKAGM K
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