| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3016 |
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| Symbol | |
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| ID | 7318313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3156406 |
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| End bp | 3157416 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643617914 |
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| Product | O-sialoglycoprotein endopeptidase |
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| Protein accession | YP_002515073 |
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| Protein GI | 220936174 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.612396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC TGGGTATCGA GACCTCCTGT GATGAGACCG GCGTGGCGGT GATCGATGCC
GAGCGCGGGC TGCTGTCCCA TGCCCTCTAC AGCCAGGTGG CCCTGCACGC GGAATACGGC
GGCGTCGTGC CGGAGCTGGC CTCCCGGGAC CATATCCGCA AGCTGCTGCC CCTGGTGCGC
CAGGCCCTGG ACGGGGCGGA CACCGCCGCC TCGGATCTCA CCGGCATCGC CTATACCTCG
GGCCCCGGCC TGCTGGGTGC GCTGCTGGTG GGTGCCGGGG TGGCGCGCAG TCTCGCCTGG
GCCTGGGGCC TGCCCGCCGT GGGCGTGCAC CACATGGAGG GGCACCTGCT CGCGCCCCTG
CTGGGCGATG AACCGCCCGA GTTTCCCTTC CTGGCCCTGC TGGTCTCCGG CGGGCATACC
ATGCTGGTGG ACGTGCAGGG GGTGGGGCGT TACCGGATCC TGGGCGAGAG CCTGGACGAC
GCCGCCGGCG AGGCCTTCGA CAAGACCGCC AAGCTGCTCG GGCTGAGCTA CCCCGGCGGC
CCGGCCCTGG CGGCCCTGGC GGAACGGGGT GATCCGGCGC GTTTCAGCTT TCCCCGCCCC
ATGACCGACC GCCCGGGCCT GGACTTCAGT TTCTCCGGGC TCAAGACCCG GGCCCTGACC
ACCCTGCGCG AGACGCGCAC CGAGCAGGAC CGGGCCGACG TGGCGCGGGC CTTCGAGGAG
GCGGTGGTGG ATACCCTGGT GATCAAGTGT CTGCGGGCGG TGCAGGAGAC CGGGGCTGAG
CGCCTGGTGG TGGCCGGTGG CGTGGGCGCC AACCGCCGCC TGCGGCAGCG GCTCAAGGAA
GCGGTGGGCG CCGAGGGCGC CAGCGTGCAC TACCCGCCAT TCGAGTTCTG CACCGACAAC
GGCGCCATGA TTGCCCTGGC GGGGTTGATG CGTTTCCAGG CGGGTGCGGG CGAGGACCTG
ACCATCCGGG CGCGCGCCCG GTGGAACCTG GAGTCGAAGT CGGAAGTGTG A
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| Protein sequence | MRILGIETSC DETGVAVIDA ERGLLSHALY SQVALHAEYG GVVPELASRD HIRKLLPLVR
QALDGADTAA SDLTGIAYTS GPGLLGALLV GAGVARSLAW AWGLPAVGVH HMEGHLLAPL
LGDEPPEFPF LALLVSGGHT MLVDVQGVGR YRILGESLDD AAGEAFDKTA KLLGLSYPGG
PALAALAERG DPARFSFPRP MTDRPGLDFS FSGLKTRALT TLRETRTEQD RADVARAFEE
AVVDTLVIKC LRAVQETGAE RLVVAGGVGA NRRLRQRLKE AVGAEGASVH YPPFEFCTDN
GAMIALAGLM RFQAGAGEDL TIRARARWNL ESKSEV
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