| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2918 |
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| Symbol | |
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| ID | 7317023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3062255 |
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| End bp | 3063289 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643617818 |
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| Product | twitching motility protein PilT |
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| Protein accession | YP_002514978 |
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| Protein GI | 220936079 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.683879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTA CGCAGCTGCT TGCGTTTGCG GTCAAGAATG GCGCCTCGGA CCTGCACCTC
TCCGCCGGGC TGCCGCCCAT GATCCGCGTC GACGGCGACG TGCGCAGGAT CAACGTACCC
GCCCTGGACC ACAAGGCTGT CCACGGCATG GTGTACGACA TCATGAACGA CAAGCAGCGC
AAGGACTACG AGGAGTTCCT GGAAACGGAC TTCTCCTTCG AGATCCCCGG CCTGGCGCGC
TTCCGTGTCA ACGCCTTCAA CCACAACCGC GGCGCCGGCG CGGTGTTCCG AACCATCCCG
AGCAAGATCC TCACCCTCGA AGAACTCAAC TGCCCGAAGA TCTTCGAGCA GATCTCCGAC
TACCCGCGCG GCATCGTGCT GGTCACCGGG CCCACCGGCT CCGGCAAGTC CACCACCCTG
GCCGCCATGA TCAACCACAA GAACGAATCC GAGTACGGGC ACATCCTCAC CGTGGAGGAC
CCGATCGAGT TCGTGCACGA GAGCAAGAAG TGCCTGGTCA ACCAGCGCGA GGTGCACCGC
GACACCCTGG GCTTCAACGA GGCCCTGCGC TCGGCCCTGC GTGAGGACCC GGACACCATC
CTGGTGGGCG AGATGCGCGA TCTGGAGACC ATCCGACTGG CCCTGACCGC CGCCGAGACC
GGTCACCTGG TGTTCGGCAC CCTGCACACC AGTTCCGCCG CCAAGACCAT CGACCGTATC
GTGGACGTGT TCCCCGCCGC GGAGAAGGAC ATGGTGCGCG CCATGCTGTC GGAGTCCTTG
CGGGCGGTGA TCTCCCAGAC CCTGCTCAAG CGCATCGGCG GCGGGCGCGT GGCGGCCCAC
GAGATCATGC TGGGCACCCC GGCCATCCGC AACCTGATCC GTGAAAACAA GATCGCCCAG
ATGTACTCGG CCATCCAGAC CAGCCAGGGC ATGGGCATGC AGACCCTGGA CATGAGTCTC
AAGGAGCTGC TCGCCAAGGG CATCATCAGC AAGGAAGACG CACGCCGCAA GGCCGCCAAC
CCGGACGCCC TCTAG
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| Protein sequence | MDITQLLAFA VKNGASDLHL SAGLPPMIRV DGDVRRINVP ALDHKAVHGM VYDIMNDKQR
KDYEEFLETD FSFEIPGLAR FRVNAFNHNR GAGAVFRTIP SKILTLEELN CPKIFEQISD
YPRGIVLVTG PTGSGKSTTL AAMINHKNES EYGHILTVED PIEFVHESKK CLVNQREVHR
DTLGFNEALR SALREDPDTI LVGEMRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRI
VDVFPAAEKD MVRAMLSESL RAVISQTLLK RIGGGRVAAH EIMLGTPAIR NLIRENKIAQ
MYSAIQTSQG MGMQTLDMSL KELLAKGIIS KEDARRKAAN PDAL
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