| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2906 |
|---|
| Symbol | |
|---|
| ID | 7317011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3051814 |
|---|
| End bp | 3052857 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643617806 |
|---|
| Product | ApbE family lipoprotein |
|---|
| Protein accession | YP_002514966 |
|---|
| Protein GI | 220936067 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCT GGCAGCGGCT GATGCCAGCC GTCCTGATCC TGCTGCTCGC CGCCTGCGGT
CCCCGCCCGG AGGTGCACAC CGAACGGCTG CTGGCCTTCG GCACCGTGGT GGAGCTGAGC
ATCTACACCC ATGACCGGGA GCTGGTCCGG GAGGCAGCCC GGGTGGTGGG CGAGGACCTG
GACTACATGC ACCGCGCCTG GCATGCCTGG GAACCGGGCC CCCTGGGGCG CACCAACCAG
CTGCTCGCCA CGGGCGCGGA ATTCTCGGCC AATCCTTCGG TGCTGCCGCT GATCCTGGAG
GGCCAGCGCC TGGAGGCGGA CAGCGACGGC CTGTTCAACC CCGCCCTCGG TGCGCTGTTC
GCCCTGTGGG GTTTCCATGG CGATGAGCGC GAAGAGCACG CCCCGCCCGA TGAGGCCGAG
ATCCGCGCCC TGCTGGAGAC CCGCCCCAGC ATGGCAGACA TCCGCGTCGA CGGCATCCGC
ATGCGCAGCG ACAACCCCGC GGTGCGCCTG GACCTGGGCG GCTTCGCCAA GGGCTACGGT
GTGGATCGGG CCGTGGAGCG CCTCAGGGAA CTGGGCATCG AGCACGCCAT CCTCAACGCC
GGCGGCGACC TGCGCGCCAT CGGCCGCCCG GGCAACCGCC CCTGGCGCAT CGGCATCCGC
CACCCGGACG GCGAGGGGGT GCTGGCCTCC CTGGAGCTTG CCGGCGACGA GAGCGTGTAC
ACCTCCGGCG ACTATGAGCG ACATTTTATT TATGCAGGCG AACGCTTCCA CCACATCCTC
GACCCGCGCA CCGGCCGGCC CGCCCGGGAG GCCCGCTCGG TGACCGTGAT CCACAGGGAT
GGCGCCCGGG CGGACGCCGC CGCCACCGCC CTGTTCGTGG CGGGCCCGGC GCGTTTCGCC
GAGATCGCCG CGCGCCTGGG CATCGAACAG GCCATGCTGG TGGACCCGCA GGGCGCGGTA
CTCATGACAC CCGCCATGGC CGAACGCATC CGCTTCGAGC AACAGCCCGC ACCGCCGGTC
ATCCTCGTGG AGCCGGCGCG ATGA
|
|---|
| Protein sequence | MSTWQRLMPA VLILLLAACG PRPEVHTERL LAFGTVVELS IYTHDRELVR EAARVVGEDL
DYMHRAWHAW EPGPLGRTNQ LLATGAEFSA NPSVLPLILE GQRLEADSDG LFNPALGALF
ALWGFHGDER EEHAPPDEAE IRALLETRPS MADIRVDGIR MRSDNPAVRL DLGGFAKGYG
VDRAVERLRE LGIEHAILNA GGDLRAIGRP GNRPWRIGIR HPDGEGVLAS LELAGDESVY
TSGDYERHFI YAGERFHHIL DPRTGRPARE ARSVTVIHRD GARADAAATA LFVAGPARFA
EIAARLGIEQ AMLVDPQGAV LMTPAMAERI RFEQQPAPPV ILVEPAR
|
|---|
| |