| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2879 |
|---|
| Symbol | |
|---|
| ID | 7315316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3018180 |
|---|
| End bp | 3018869 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643617779 |
|---|
| Product | Ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_002514939 |
|---|
| Protein GI | 220936040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC CCGATCTGAT CGCCCCGTCC ATCCTTTCCG CCGATTTCGC CCGTCTGGGT
GAGGAAGTGG ACAACGTGCT GGCCTCCGGC GCCGATATCG TGCATTTCGA TGTCATGGAC
AACCACTACG TGCCCAATCT GACCATCGGC CCGCTGGTGT GCGAGGCCCT GCGCAAGCAC
GGCGTGACCG CGCCCATCGA TGTGCACCTG ATGGTCAAGC CGGTGGACCG CATCATCCCG
GACTTCGCCA AGGCCGGCGC CAGCTACATC ACCTTCCACC CGGAGGCCTC CGAGCACATC
GACCGCACCC TCCAGCTGAT CAAGGGCGAA GGCTGCAAGG CGGGCCTGGT GTTCAACCCG
GCCACCCCGC TGTCCTACCT GGACTACGTG ATGGACAAGG TGGACATGAT CCTGCTGATG
TCCGTGAACC CCGGTTTCGG CGGCCAGAAG TTCATCCCCG CCACCCTGGA CAAGCTGCGC
GAGGCGCGCA AGCGCATCGA CGAGTCCGGC CTGGACATCC GCCTGGAGAT CGACGGCGGC
GTGAAGGCGG ACAACATCCG CGAGATCAAG GCCGCCGGTG CCGACACCTT CGTGGCCGGC
TCTGCCATCT TCGGCGCCGC CAGCAAGGAT GACCCGCACC ACTACGAGAG CATCATCAAG
CAGATGCGCG ACGAGCTGGC CAAGGCCTGA
|
|---|
| Protein sequence | MAKPDLIAPS ILSADFARLG EEVDNVLASG ADIVHFDVMD NHYVPNLTIG PLVCEALRKH
GVTAPIDVHL MVKPVDRIIP DFAKAGASYI TFHPEASEHI DRTLQLIKGE GCKAGLVFNP
ATPLSYLDYV MDKVDMILLM SVNPGFGGQK FIPATLDKLR EARKRIDESG LDIRLEIDGG
VKADNIREIK AAGADTFVAG SAIFGAASKD DPHHYESIIK QMRDELAKA
|
|---|
| |