| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2791 |
|---|
| Symbol | |
|---|
| ID | 7317308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2930376 |
|---|
| End bp | 2931113 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643617691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002514851 |
|---|
| Protein GI | 220935952 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3137] Putative salt-induced outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000611146 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTTCA TGAAGCAAGC GATCACCTAT TCTACCAGTC TCCTGGGTGC CGGCCTGCTG
GCCATGATGC CTGTGCACGC CGACGACTGG GGCGACGAGG GATGGAGCGG TTTTGCCGAG
CTGGGCGCCG TCTGGACCAC CGGCAACACC GAGGCCGAGA CCATCAACGC CAAGACCCGC
CTGCGCTACG AGGAGGAATC CTGGCGCCAC ACCGGGCAGC TGGAGGCGCT GAGGCGTTCG
GAAGAAGGGA CCTCCACCGC CGAGCGCTAC GTGGGCAACT TCAAGAGCGA CTGGAAATTT
CGCCCCCGGG AATACCTGTT CGCCGCCCTG CGCTACGAGA AGGATCGCTT CAGTGGCTAT
GACTACCAGT CCTCGGTCGC TGCCGGTTAC GGCCGCCGGG TCATCGACAC CGATCGCACC
CGCCTGGAAC TCGAGGCCGG TGCCGGTTAC CGCCAGAGCA GGCTCGAATC CGGCGAACGC
GATGACGACG CCATCCTGCG CGGCGCCCTG TCCTTCGAAC ACCGCCTGAG CGAGACCGCC
CGGCTGGGCC AGGACCTGCT CATCCAGAGC GGCAACGACA ACACCGAGAT CGAGTCGGTG
ACCACCCTGA CCGCCGCCAT CAACAGCAAG CTGGCCATGC GCCTGTCGCT CACCGCCAAG
CACAACACCG ACGTGCCGCC CGAGCGGGAG AAAACCGACA CCATCACCGC GGTCAGCCTG
GTTTACAATT TCTGGTAA
|
|---|
| Protein sequence | MPFMKQAITY STSLLGAGLL AMMPVHADDW GDEGWSGFAE LGAVWTTGNT EAETINAKTR
LRYEEESWRH TGQLEALRRS EEGTSTAERY VGNFKSDWKF RPREYLFAAL RYEKDRFSGY
DYQSSVAAGY GRRVIDTDRT RLELEAGAGY RQSRLESGER DDDAILRGAL SFEHRLSETA
RLGQDLLIQS GNDNTEIESV TTLTAAINSK LAMRLSLTAK HNTDVPPERE KTDTITAVSL
VYNFW
|
|---|
| |