Gene Tgr7_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2784 
Symbol 
ID7317300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2925347 
End bp2926366 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content63% 
IMG OID643617684 
Productputative porin 
Protein accessionYP_002514845 
Protein GI220935946 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000063685 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC AAGTGCTCGT GGTGGCCGTG GCCGCTGCCC TCGCTGTGCC CGCCGTGGCC 
ATGGCCGATG CCAGCATCTA CGGCCGTGCC CATGTGTCCT TTGACTACCT GGATAACGAT
GGCGACTACA GCGCCACCAA CGTCTCCAAC AACTCCAGCC GCGTCGGCGT GCGCGGTTCC
CAGCAGCTGA CCGACGATCT GAAGGGTTTC TTCCAGGTCG AGTCCAACTT CGAGGCCGCT
GGTGATTCCA ACAACGGTCG TCTGGGCACC CGCAACACCT TCGTGGGTCT GGAAGGCGGC
TTCGGTCGCA TTCGCGCCGG TTACAGCGAC ACCGTCACCA AGGGCATCAG CCGCGCCACC
GATCTGTTCG GTGACCAGGC CGGTGACTCC CGCAACATGC TCAACGGCAT CGGTGACCAG
CGCTTCCGCA ATGCCCTGTT CTACACCAGC CCGAAGCTGG GCCCCGTCAC CGTGAGCGTT
GAGTACTCCA CCAACGACAA CACCAACAGC ACCGCTGCCG ACAGCAACGA CGACCAGGCC
TACAGCCTGG GTGCCGTCTA CCGCGAAGGC CCCCTGTACA TCGGTCTGGG CTACGAGGCC
CGTGATTTCG CCAACGGCAC CGACAACAAG GCCACCCGTC TGGGTGCCTA CTACGACATG
GACGCCTTCC GCTTCACCGG TCTGTACCAG GCCGCCACCG ACGCCGCCGA CAACGACCTG
AACACCTTCG GTCTGGGCGT GCGCTACACC ATGGGCAAGA CCCAGCTGAA GGCCCAGTAC
TACTGGACCG ACAACGACGG CACCGATGCT GATGCCGCCA TGCTGGCCCT GGGTGTGCAG
TACAACCTGA CCCGCCAGAC CAGCTTCTAC GCCGCCTATG CCATGACCGA CAATGATGAC
ACTGCCACCT ATCGTCCCGC TGGCGGCGGC CATGGTGACA ACATCCCCGG CGTGGTGGGT
GGTTCCTCCC CCTCCATCAT CAGCTTCGGC GTGATGCACA ACTTCAAGTT CGATTTCTGA
 
Protein sequence
MKKQVLVVAV AAALAVPAVA MADASIYGRA HVSFDYLDND GDYSATNVSN NSSRVGVRGS 
QQLTDDLKGF FQVESNFEAA GDSNNGRLGT RNTFVGLEGG FGRIRAGYSD TVTKGISRAT
DLFGDQAGDS RNMLNGIGDQ RFRNALFYTS PKLGPVTVSV EYSTNDNTNS TAADSNDDQA
YSLGAVYREG PLYIGLGYEA RDFANGTDNK ATRLGAYYDM DAFRFTGLYQ AATDAADNDL
NTFGLGVRYT MGKTQLKAQY YWTDNDGTDA DAAMLALGVQ YNLTRQTSFY AAYAMTDNDD
TATYRPAGGG HGDNIPGVVG GSSPSIISFG VMHNFKFDF