Gene Tgr7_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2629 
Symbol 
ID7315348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp2772648 
End bp2773706 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content69% 
IMG OID643617530 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_002514691 
Protein GI220935792 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.794178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTCC GCACCCAAAC CTCCCCCCAC ATGACCCCTG CCCACAACGT GGGCCAGGTG 
ATGCGCCGCG TGCTCTACGC CCTGGTGCCG GGCACGCTCG CCATGGCCTG GTACTTCGGC 
TGGGGCGTGC TGATCAACGT GGCCCTGGCG GTGGTGCTGG CGGTGGGCCT CGAGGCGCTC 
ATGCTGGTGC TGCGCCGGCG GCCGGTGATC CCGACGCTCT CCGACTACAG CGCGGTAGTC 
ACCGGCTGGC TGTTCGCCCT GGCCCTGCCG CCGCTCACCC CCTGGTGGGT GACCCTGGTG 
GGCGTCGGTT TCGCCATCGT GGTGGCCAAG CACCTCTACG GCGGCCTGGG CTACAACCCC 
TTCAACCCGG CGATGGTGGG TTACGTGGTG GTGCTGCTGT CATTTCCCCG GGAGATGACC 
CTGTGGCTGC CGCCCACGGC CCTGGCCGAG GTGAGCTTCA GCCCGACCCA GGCCCTGGCC 
ATCACCTTCC TGGGCCAGCT ACCGCCCGGA CTGACCTGGG ACGCCATCAC CACCGCCACG 
CCGCTCGATC TCATGAAGAC CGAGCTGGCC AGGAACCTGA CCATCACGGA GATCCGCGAC 
AACCCGCTGT TCGGCGATTT CTCCGGCCGG GGCTGGGAAT GGATCGGCAA CTGGTTCCTG 
CTGGGGGGCA TCGCGCTGCT GTTCATGCGC GTGATCACCT GGCACATCCC CGTGGCGGTG 
CTGGGCGGCC TGGCCGTCAC CGCGGGTCTG TTCTGGATCG TCGACCCGGA CGCCTTCGCC 
TCGCCCGCCT TCCACGTGTT CAGCGGCGCC GCCATCCTGG GCGCCTTCTT CATCGCCACG 
GACCCGGTGT CCGCCAGCAC CACGCCGATG GGGCGCATCC TCTACGGCCT GGGCATCGGC 
GTGCTCATCT ACGTGATCCG CACCTGGGGC GGCTACCCGG ACGCGGTGGC CTTCGCCGTG 
CTGCTCATGA ATATGGCCGC GCCCACTATC GATCACTACA CCCGGCCAAG GGTGTTCGGC 
CAGAAGCCGC CACGGCGCGA GAACGGTGGC GCGCCATGA
 
Protein sequence
MHFRTQTSPH MTPAHNVGQV MRRVLYALVP GTLAMAWYFG WGVLINVALA VVLAVGLEAL 
MLVLRRRPVI PTLSDYSAVV TGWLFALALP PLTPWWVTLV GVGFAIVVAK HLYGGLGYNP 
FNPAMVGYVV VLLSFPREMT LWLPPTALAE VSFSPTQALA ITFLGQLPPG LTWDAITTAT 
PLDLMKTELA RNLTITEIRD NPLFGDFSGR GWEWIGNWFL LGGIALLFMR VITWHIPVAV 
LGGLAVTAGL FWIVDPDAFA SPAFHVFSGA AILGAFFIAT DPVSASTTPM GRILYGLGIG 
VLIYVIRTWG GYPDAVAFAV LLMNMAAPTI DHYTRPRVFG QKPPRRENGG AP