Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2615 |
Symbol | |
ID | 7315334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2755661 |
End bp | 2758576 |
Gene Length | 2916 bp |
Protein Length | 971 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643617516 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002514677 |
Protein GI | 220935778 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.104389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACGG ACGTCAGCAC CGAACAGAAT ACCCGCCCGG CCGCCGCAGG CGCCGCACCC GAAGTCAGCC CAGAATCCCA GGTGACCGCC GCCGAACTGG CGGCCACCGC CCCCGGTCAG CACCACGTGA TCCGCCGTAA CGGCAAGGTC ACCGCCTTCG ACGCCTCCAA GATCAAGGTG GCCATCACCA AGGCCTTCCT GGCAGTGGAG GGCGGCAATG CCGCCGCCAG CCGCCGCATC CACGACATCG TCGCCGAGCT CGCCGAGCAG GTGTGCGAGA ACCTGTTCCG CCGCGCCGGC GGCTCCGCCG TCACCGTGCA CATCGAGGAC ATCCAGGACC AGGTGGAACT GGCCCTGATG CGCGGCGGCC ACCACAAGAT CGCCCGCGCC TACGTGCTCT ACCGGGAGCA GCAGGCCCAG AAGCGCGCCG CCGAGGCCGC CACCAGGAAG CCCGCCCGGC AGGCCGAGGC CGCCGTCATC CACGTCACCC GTCCCGACGG CACCCGTGCC CCCCTGGACA CCGCCCGCCT GGTCAAGGTG GTGGAAGAGG CCTGCGCCGG TCTCGAGGCC GTGGACGGCC AGCTGATCCT CAACGAGGCC CAGCGCAACC TGTTCGACGG CGTGGCCGAG AAGGACGTGG GCACCGCGCT GGTCATGAGC GCCCGGGTGC TCATCGAGAA GGAGCCCAAC TACTCCCAGG TCACCGCCCG CCTGCTCATG GACACCCTGC GCCGCGAGGC TCTGTCCTTC ATCGCCGGCC TGCCCCAGGC CGCCACCCAG GCGGAGATGA CCCAGCGCTA CCCGGAATAC TTCAAGGCCT ACGTGAAGCG CGCCGCCGAG CTGGAACTGC TGGACAGCGA GCTGACCCGC TACGACCTGG ACCGCCTGGG CGCCGCGCTC AAGCCCGAGC GCGACCTGCA GTTCACCTAC CTGGGCCTGC AGACCCTCTA CGACCGCTAC TTCATCCACT CCGGCGGCGT GCGCTTCGAG CTGCCCCAGG CCTTCTTCAT GCGCGTGGCC ATGGGTCTGG CCATCCACGA GATCGACCGT GAAGGCCGCG CCATCGAGTT CTACAACCTG CTGAGCTCCT TCGACTTCAT GAGCTCCACG CCGACCCTGT TCAACTCCGG CACCCTGCGT CCGCAGCTCT CCTCCTGCTA CCTGACCACC GTGCCCGACG ACCTGGACGG CATCTTCGGC GCCATCAAGG ACAACGCCCT GCTGTCCAAG TTTGCCGGTG GCCTGGGCAA CGACTGGACC CGGGTGCGCG GCATGGGCGC CCACATCAAG GGCACCAACG GCAAGTCCCA GGGCGTGGTG CCGTTCCTGA AGGTCGCCAA CGACACGGCG GTCGCCGTGA ACCAGGGCGG CAAGCGCAAG GGCGCCGTGT GCGCCTATCT CGAGACCTGG CACGTGGACG TGGAAGAGTT CATCGAGCTG CGCAAGAACA CCGGCGACGA CCGCCGCCGC ACCCACGACA TGAACAGCGC CAACTGGATT CCCGATCTCT TCATGAAGCG CGTGGCGGAA GAGGGCGAGT GGACCCTGTT CTCCCCCAAC GAGACCCCCG ACCTGCATGA CCTGGTCGGC GAGGCCTTCG AGCAGCGCTA CGCCGAGTAC GAGGCCAAGG CCGCCCGGGG CGAGATCAAG GTGTTCAAGA AGCTCAAGGC CGTGGACCTG TGGCGCAAGA TGCTCGCCAT GCTGTTCGAG ACCGGCCATC CCTGGATGAC CTTCAAGGAC CCCTGCAACC TGCGCAGCCC CCAGCAGCAC GTGGGCGTGG TGCACAGCTC GAATCTCTGC ACCGAGATCA CGCTCAACAC CTCGGACGAC GAGATCGCCG TGTGCAACCT GGGCTCCGTG AACCTGGCCG CCCACGTGGA CGAGAACGGC CTGAACCTGG AGAAGCTGGA GCGCACGGTG AGCACCGCCA TGCGCATGCT GGACAACGTC ATCGACTACA ACTACTACTC CGTGCCCCAG GCCCGGCGCT CCAACCTGCG CCACCGTCCG GTGGGCCTGG GCATCATGGG TTTCCAGGAT GCCCTCTACC AGCAGCGCAT CCCCTACGCC TCGGAAGATG CCGTGGAGTT CGCCGACCGT TCCATGGAGG CGGTCTCCTA CTACGCCATC AAGGCCTCCA CGGATCTCGC CGAGGAGCGC GGCCGCTACC AGAGCTTCGA CGGCTCCCTG TGGAGCCAGG GCGTGCTGCC CATCGACTCC ATCGAGCTGC TGGCCAAGTC CCGCGGCCAG TACCTGCAGC AGGACACCAG CATGACCTTC GACTGGGACA GCCTGCGCGA CCGGGTCAAG ACCGTGGGCA TGCGCAACTC CAACACCATG GCCATCGCGC CGACGGCGAC GATCTCCAAC ATCTGCGGCG TGAGCCAGTC CATCGAGCCC ACCTACCAGA ACCTGTTCGT GAAATCGAAC CTCTCCGGCG AGTTCACCGT GATCAACCCG AACCTGGTGA ACGACCTGAA GGCGCGCAAG CTGTGGGACG AGGTGATGGT CAACGACCTC AAGTACTACG ACGGCTCCGT GCAGCCCATC GACCGGGTGC CCGCGGACCT CAAGCAGCTC TACGCCACCG CCTTCGAGCT GGACGCCCGC TGGCTGGTGG AGGCCGCCTC CCGCCGCCAG AAGTGGCTGG ACCAGGCCCA GAGCCTGAAC CTCTACATGG CCGAGCCCTC CGGCAAGAAG CTGGACAATC TCTACAAGCT CGCCTGGGTG CGGGGTCTGA AGACCACCTA CTACCTGCGC TCCATGGGCG CCACCCACGT GGAGAAGAGC ACCGTGGCCG ATGCCAGCCG GGCTAACAAG CTTAACGCGG TGAAGGGCGC CGATGCGGCC GCGCCCGCCA CCGAGGCGCC GAAGATGTGC TCGATCCTCG ATCCCGAATG CGAAGCCTGC CAATAG
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Protein sequence | MQTDVSTEQN TRPAAAGAAP EVSPESQVTA AELAATAPGQ HHVIRRNGKV TAFDASKIKV AITKAFLAVE GGNAAASRRI HDIVAELAEQ VCENLFRRAG GSAVTVHIED IQDQVELALM RGGHHKIARA YVLYREQQAQ KRAAEAATRK PARQAEAAVI HVTRPDGTRA PLDTARLVKV VEEACAGLEA VDGQLILNEA QRNLFDGVAE KDVGTALVMS ARVLIEKEPN YSQVTARLLM DTLRREALSF IAGLPQAATQ AEMTQRYPEY FKAYVKRAAE LELLDSELTR YDLDRLGAAL KPERDLQFTY LGLQTLYDRY FIHSGGVRFE LPQAFFMRVA MGLAIHEIDR EGRAIEFYNL LSSFDFMSST PTLFNSGTLR PQLSSCYLTT VPDDLDGIFG AIKDNALLSK FAGGLGNDWT RVRGMGAHIK GTNGKSQGVV PFLKVANDTA VAVNQGGKRK GAVCAYLETW HVDVEEFIEL RKNTGDDRRR THDMNSANWI PDLFMKRVAE EGEWTLFSPN ETPDLHDLVG EAFEQRYAEY EAKAARGEIK VFKKLKAVDL WRKMLAMLFE TGHPWMTFKD PCNLRSPQQH VGVVHSSNLC TEITLNTSDD EIAVCNLGSV NLAAHVDENG LNLEKLERTV STAMRMLDNV IDYNYYSVPQ ARRSNLRHRP VGLGIMGFQD ALYQQRIPYA SEDAVEFADR SMEAVSYYAI KASTDLAEER GRYQSFDGSL WSQGVLPIDS IELLAKSRGQ YLQQDTSMTF DWDSLRDRVK TVGMRNSNTM AIAPTATISN ICGVSQSIEP TYQNLFVKSN LSGEFTVINP NLVNDLKARK LWDEVMVNDL KYYDGSVQPI DRVPADLKQL YATAFELDAR WLVEAASRRQ KWLDQAQSLN LYMAEPSGKK LDNLYKLAWV RGLKTTYYLR SMGATHVEKS TVADASRANK LNAVKGADAA APATEAPKMC SILDPECEAC Q
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