| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2580 |
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| Symbol | mdoD |
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| ID | 7315677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2723122 |
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| End bp | 2724711 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643617481 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002514642 |
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| Protein GI | 220935743 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCTG GGTCCATTGT TCGTGCTTTT TTGTCTGGCC GGGTGCCCCG GCCAGTGTTC
GCCTTGCTCT TGTGTCTCTG TTTCATATTG GCTGCTGGCA GGGTCGATGC CTTCGCCTTC
GAGGAGGTAG TGGCCCGGGC TCAGCAACTG GCCGGCCAGG CCTACGTGCC GCCCACCCCT
ATTCCCCGTT TCATGCGGGA ACTCGACTAC GATGCCTATC AGGGCATTCG TTTCGACGAG
GCGCGCAGCC TATGGCGGGA GAGCAATTCC CGTTTCCAGG TGATGCTGTT CCCGCCGGGA
CTGTTCTACA CCCACCCGGT CGAGATACAC GTGGTGGATG CCGAGGGCGT GCACCGGCTG
CCGTATCGCA AGTCCTACTT TGACTTCTCG AATCCGGAGC TGGAGAAGCG CGTTCCGCCG
AACCTGGGCT ATGCGGGCTT CAAGCTGACC TACCCCCTCA AGGCCCGCGG CGAGCAGAAC
CAGTTCCTGG TGTTCGCCGG CGCCAGTTAT TTTCGCGGTG TGGGCAGGGA CAATGCCTGG
GGGCTGTCCG CCCGGGGCAT TGCCGTTGAC ACCGGCCTTC CCGGCGGCGA GGAATTCCCG
TCCTTCACCG CGTTCTGGCT GGTGCGCCCC TCGCCCCAGG CCGACAGCAT GCGTTTCTAT
GCCCTGCTGG ACGGCAAGCG CGTCACCGGG GCCTACCAGT TTGATGTCAC GCCGGGCGAG
AGTACCCGGA TTCAGGTCAA GTCCGTGGTG TTCGCACGGG ACAGGATCGA ACTGCTGGGG
CTCGCGCCGC TGACCAGCAT GTTCTTCTAT GGCGAGAACA CCGCCCGCCC CGTCGGCGAG
TGGCGCCCCG AGGTGCATGA TTCCGACGGT TTGCTGATCC ATGACGGGGT CAGCGGCGAG
TGGCTGTGGC GCCCGCTGAT CAACCCCCGG CGACTGGAGA TGGACGTCTT CCAGACCGAG
GGGGTCCGCG GTTTCGGTTT GCTGCAACGG GACACCCGGT TTGACAACTA CCAGGACCTG
GGCGCCCGCT ACGACCAGCG CCCCAGCGCC TGGGTGACGG CCCGGGGTGA CTGGGGACCG
GGACGCGTGG TCCTCACGCA GCTGCCCACC AACACGGAAA CCAACGACAA CATGGTGGCG
TTCTGGAGCC CCGCCGAACC GCTGGCACCC GGCGCGTCCC TGCGTCTGGA CTACCAGCTG
GATATCGGCG GGCCGGGGGT GGCCCCCAGC CCCACTGGCC AGGCCGTGAA CACCTTCGTG
GGCGACGGGA GCATCATCGG TGGCGGCAAC GTGGAAGGGG CCTACCGGGT CGTCGTGGAT
TTTCGCGGGG GTCCGCTGGA CAGGCTGCGC CCCACGGCGA CGCTGAGCAG TTCAGTCACG
GCCCTGGATG GCGGCGAGGT CATCGAGCAC TTCGTGGAAT ACAACCCGGC GGCACAGGCC
TGGCGGCTGT CGCTGCTGGC CAGGCCGGCC CGGGATCGTG CCCTGTCGCT GCGTGCCTTC
CTGGCCCACG ATGGCCAGCC CGTGACCGAG ACCTGGACCT ACCGCCTGCC GCCGGACAAC
GACATCCTGA TCTCCGGGCG GCGGCGATGA
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| Protein sequence | MVSGSIVRAF LSGRVPRPVF ALLLCLCFIL AAGRVDAFAF EEVVARAQQL AGQAYVPPTP
IPRFMRELDY DAYQGIRFDE ARSLWRESNS RFQVMLFPPG LFYTHPVEIH VVDAEGVHRL
PYRKSYFDFS NPELEKRVPP NLGYAGFKLT YPLKARGEQN QFLVFAGASY FRGVGRDNAW
GLSARGIAVD TGLPGGEEFP SFTAFWLVRP SPQADSMRFY ALLDGKRVTG AYQFDVTPGE
STRIQVKSVV FARDRIELLG LAPLTSMFFY GENTARPVGE WRPEVHDSDG LLIHDGVSGE
WLWRPLINPR RLEMDVFQTE GVRGFGLLQR DTRFDNYQDL GARYDQRPSA WVTARGDWGP
GRVVLTQLPT NTETNDNMVA FWSPAEPLAP GASLRLDYQL DIGGPGVAPS PTGQAVNTFV
GDGSIIGGGN VEGAYRVVVD FRGGPLDRLR PTATLSSSVT ALDGGEVIEH FVEYNPAAQA
WRLSLLARPA RDRALSLRAF LAHDGQPVTE TWTYRLPPDN DILISGRRR
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