Gene Tgr7_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2534 
Symbol 
ID7316557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2676869 
End bp2677525 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID643617436 
Productouter membrane protein W 
Protein accessionYP_002514597 
Protein GI220935698 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGCAAGCGTT CGCAGCCGCC GGCTGCCTGG CCCTTTCCGC CGCCCCTGCC 
ATGGCCCTGG ATCAGGGCGA TATGCTGGTG CGCTTCGGGC CGACCTGGGT GATGCCCAAT 
GATGATAGTG GGGCTGTCAG CGCGAACGGC ACTGCTATCG CGGGTTCTGG GGTTGAGGTG 
GATAATGGCG TTGCGCTCGG GATCAGCTTC ACCTACATGA TGACGCCGAA CCTGGGTGTC 
GAGGTGCTCG CGGCCACCCC GTTTTCCCAT GACGTGAAGG GCAAGGGGAG TTTGCAGGGG 
GAGGGTACTA TTGCCACCAT CAAGCACCTG CCGCCCACCG TGTCTCTGCA GTATCACTTC 
TCGGACTTCG GTCAGTGGCG TCCCTATGTG GGTGCGGGCA TCAACTACAC CACCTTCTTC 
GACGAAAAAG GCAAAGGTAA CTTCGCGGGT GCGGACGTGA GCCTCAAGGA CTCCTGGGGC 
TGGGCCTTGC AGGCAGGGAT GGATTTTGAT GTGAACGATC GCTGGTTCGT GGGCGCCAGT 
GCCTACTACA TCGCGATCGA CACCACCGCG ACCATTCGCG CTGGCGCCGA TACCGTCAAG 
GTCGACGTGG ACATCGACCC CTGGGTCCTG ATGGTCGGCG GCGGTCTGCG CTTCTAA
 
Protein sequence
MKKWQAFAAA GCLALSAAPA MALDQGDMLV RFGPTWVMPN DDSGAVSANG TAIAGSGVEV 
DNGVALGISF TYMMTPNLGV EVLAATPFSH DVKGKGSLQG EGTIATIKHL PPTVSLQYHF 
SDFGQWRPYV GAGINYTTFF DEKGKGNFAG ADVSLKDSWG WALQAGMDFD VNDRWFVGAS 
AYYIAIDTTA TIRAGADTVK VDVDIDPWVL MVGGGLRF