| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2461 |
|---|
| Symbol | |
|---|
| ID | 7318178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2611240 |
|---|
| End bp | 2613021 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643617365 |
|---|
| Product | Asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_002514526 |
|---|
| Protein GI | 220935627 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.828988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCTGCGGTGA ACTGAATTTC CACGGCGCGC TCCCCGAGCT CTCCTCCATC
CGGCGCATGC TGGACAGGCT GGAGCGGCGC GGTCCCGACC ACGAAGGCAT GTGGAGCGAC
GGCTCGCTCG CCTTCGGCCA CCGGCGCCTG TCCATCCTCG ATCTCTCCGA ACGTGCCCAT
CAGCCCATGC TGGATCCGGG GCTCGGCTAT GCGGTGGTGT TCAACGGCAC GATCTACAAC
TTCCGGGATC TGCGTGCGCA GCTGGAGGCG CGCGGGCACC AGTTCTTCTC CACCGGCGAC
ACCGAGGTGA TCCTCAAGGC CTACGCCGAG TGGGGCGGGG ACTGCGTGCG TCACTTCAAG
GGCATGTTCG CCATCGCCCT GTGGGACCTG CGCAACCGGC GCCTGTTCCT GGCCCGGGAC
CGCATGGGCA TCAAGCCCCT CTACTACACC CAGGACGCCC AGCGCCTGCG CTTTGCCTCC
AACAGCCAGG CCCTGCTGGC CGCCGGCGGC GTGGACACGG CCATCGACCC GGTGGCCCTG
CATCACCACT TCACCCTGCA CGCGGTGGTG CCCGCGCCGC GCACCCTGTT CAAGGGCATC
CGCAAGCTGC CGCCGGCCCA CACCCTGACC ATCGAGGCCG ACGGCCGCAG CCACCTGACC
CGTTACTGGC ACCTGGATGC CGTGCGCCCT TCAGAGCCGC GCAGCGAGCA GGAATGGATC
GATGCCATCC ACGAGAGCCT GCGCCTGGCG GTGAAGCGCC GGTTGGAGAT CGCCGACGTG
CCCGTGGGCG TGCTGCTCTC AGGCGGGCTG GACTCCAGCC TGCTGGTGGC GCTGCTGGCC
GAGAGCGGCG TGCAGGGCCT GAAGACCTTC ACCGTGGGCT TCGAGGACCA GCCCGAGGAG
AAGGGCAGCG AGTTCGAGTA TTCCGACCCG GTGGCCGAGC GCTACGCCAC CGAGCATCAC
CGCTTCCACG TGCCCAACGC CGAGGTGCTC ACCCGCCTGC CCGAGGCGGT GGACGCCATG
GCCGAGCCCA TGGTGGGCCA GGACGCGGTG GCCTTCTACC TGCTCTCGGA GCAGGTCTCC
AGGCACGTCA AGGTGGTGCA GTCGGGGCAG GGTGCGGACG AGGTCTTCGG CGGCTATTTC
TGGTATCCGC GCATGGCCGG GGAGACCGAG GGCAGCCGGG TGGAGCGTTT CCGCAAACAC
TACTTCGACC GGGACCACGA CGAGTTCGCG CGCATGATCG ACCCGGCCCT GGTGGACGGG
GACCATACCG CCGCGCTGAT CGGCGAGCTG CTGGACGCCC CGGGCGCGGA CACCATGCTG
GACGCGGTGC TGCGCCTGGA CGTGACCACC CTGATCGTGG ACGACCCGGT CAAACGGGTG
GACAACATGA CCATGGCCTG GGGCCTGGAG GCCCGGGTGC CGTTCCTGGA CCACGAACTG
GTGGAGCTGG CCGCCGCCAT GCCGCCGGAG CTGAAACTCC AGGAGGGCGG CAAGTACGCC
CTGCGCAAAA TAGCCCGCGG CCGCCTGCCC GATGCGGTGA TCGACCGGCC CAAGGGCTAT
TTCCCGGTGC CGGCCCTGAA ATACGTGCGC GGCGAGTTCC TGGACTTCAT GCGCGACATC
CTGGATTCCC TCGCCTGCCG GGAGCGGGGC CTGTACCAGC GGGATTACGT GGAGAGGCTG
CTCAAGGCCC CCGAGCAGCA CCTTACCCGC ATCCAGGGCA GCAAGCTCTG GCACCTGGCC
CTGCTGGAGT TCTGGCTGCA GCGCAACGTG GACGGGCGGT GA
|
|---|
| Protein sequence | MCGICGELNF HGALPELSSI RRMLDRLERR GPDHEGMWSD GSLAFGHRRL SILDLSERAH
QPMLDPGLGY AVVFNGTIYN FRDLRAQLEA RGHQFFSTGD TEVILKAYAE WGGDCVRHFK
GMFAIALWDL RNRRLFLARD RMGIKPLYYT QDAQRLRFAS NSQALLAAGG VDTAIDPVAL
HHHFTLHAVV PAPRTLFKGI RKLPPAHTLT IEADGRSHLT RYWHLDAVRP SEPRSEQEWI
DAIHESLRLA VKRRLEIADV PVGVLLSGGL DSSLLVALLA ESGVQGLKTF TVGFEDQPEE
KGSEFEYSDP VAERYATEHH RFHVPNAEVL TRLPEAVDAM AEPMVGQDAV AFYLLSEQVS
RHVKVVQSGQ GADEVFGGYF WYPRMAGETE GSRVERFRKH YFDRDHDEFA RMIDPALVDG
DHTAALIGEL LDAPGADTML DAVLRLDVTT LIVDDPVKRV DNMTMAWGLE ARVPFLDHEL
VELAAAMPPE LKLQEGGKYA LRKIARGRLP DAVIDRPKGY FPVPALKYVR GEFLDFMRDI
LDSLACRERG LYQRDYVERL LKAPEQHLTR IQGSKLWHLA LLEFWLQRNV DGR
|
|---|
| |