Gene Tgr7_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2342 
Symbol 
ID7318131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2466360 
End bp2467238 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content59% 
IMG OID643617241 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_002514408 
Protein GI220935509 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGGA TCATCCTGGC CGGAGGCTCG GGCACACGAC TGTACCCGGT GACACAGGCA 
GTCTCCAAGC AGCTGTTGCC CATCTATGAC AAACCCATGG TGTATTACCC ACTCAGCACG
CTCATGCTGG CGGGCATTCG GGATATCCTG CTGATTTCAA CACCCCAGGA CACGCCCCGT
TTCGAACAGT TGCTTGGTGA CGGCAGCCAG TGGGGGATAT CCATTCAGTA TGCCGTGCAA
CCGCAGCCCC AGGGTATTGC CCAGGCGTTC CTGATCGGCC GTGAATTCAT CGGAACCGAC
GCCTGCACAT TGATTCTGGG AGATAACATC TTCTACGGCC ACGACCTTCA GCGACTGCTC
AGGGAAGCCA GCGCCAGGAC AGAAGGCGCC ACCGTTTACG CCTACCCCGT CAAGGATCCG
GAGCGCTATG GCGTAGTGGA GTTCGACACG GAAGGTCGAG CCATCGGGCT TGAAGAGAAA
CCGGCCAGAC CACGTTCCAG GTACGCCGTA ACGGGACTGT ACTGTTACGA CAACCGGGTG
GTCGAGGCGG CATCCGGACT CAAGCCGTCG GGCCGCGGGG AACTGGAGAT CACGGACATC
AATCTCTGGT ATCTGGCACA GCACGCCCTG CACGTACAGG TCATGGGACG CGGCATGGCC
TGGCTTGATA CGGGAACCCA CGAATCCCTG CTGGAGGCCT CCACCTACAT CGAAACCATC
GAGAAACGCC AGGGCCTCAA GGTGGCCTGC CCCGAAGAAA TCGCCTACCG AAAGGGCTAC
ATCGATGCGG AACAGGTGCG CAGACTGGCC GAACCGCTGG GCAAAAATGG CTACGGCCAG
TATCTGTTGC AAATACTCGA GGACAGGGTG TTCATGTAA
 
Protein sequence
MKGIILAGGS GTRLYPVTQA VSKQLLPIYD KPMVYYPLST LMLAGIRDIL LISTPQDTPR 
FEQLLGDGSQ WGISIQYAVQ PQPQGIAQAF LIGREFIGTD ACTLILGDNI FYGHDLQRLL
REASARTEGA TVYAYPVKDP ERYGVVEFDT EGRAIGLEEK PARPRSRYAV TGLYCYDNRV
VEAASGLKPS GRGELEITDI NLWYLAQHAL HVQVMGRGMA WLDTGTHESL LEASTYIETI
EKRQGLKVAC PEEIAYRKGY IDAEQVRRLA EPLGKNGYGQ YLLQILEDRV FM